Detailed information NTG0513627

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: KWZ00_RS08705
• Genome accession: NZ_CP078115
• Coordinates: 1650781..1651365 (-)
• Length: 194 a.a.
• NCBI ID: WP_003694238.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae strain O1G1370
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1645781..1656365

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KWZ00_RS08670 (KWZ00_08670)	-	1646201..1646500 (+)	300	WP_010359269.1	DUF2818 family protein	-
KWZ00_RS08675 (KWZ00_08675)	-	1646617..1647513 (-)	897	WP_003691917.1	polyprenyl synthetase family protein	-
KWZ00_RS08680 (KWZ00_08680)	-	1647497..1647721 (-)	225	WP_003689929.1	exodeoxyribonuclease VII small subunit	-
KWZ00_RS08690 (KWZ00_08690)	rsgA	1647834..1648757 (-)	924	WP_003694242.1	ribosome small subunit-dependent GTPase A	-
KWZ00_RS08695 (KWZ00_08695)	-	1648762..1650618 (-)	1857	WP_003689927.1	ABC transporter ATP-binding protein	-
KWZ00_RS08700 (KWZ00_08700)	-	1650644..1650781 (-)	138	WP_003689926.1	hypothetical protein	-
KWZ00_RS08705 (KWZ00_08705)	ruvA	1650781..1651365 (-)	585	WP_003694238.1	Holliday junction branch migration protein RuvA	Machinery gene
KWZ00_RS08710 (KWZ00_08710)	-	1651447..1651773 (-)	327	WP_003689921.1	PepSY domain-containing protein	-
KWZ00_RS08715 (KWZ00_08715)	-	1651834..1652520 (-)	687	WP_003689919.1	septal ring lytic transglycosylase RlpA family protein	-
KWZ00_RS08720 (KWZ00_08720)	trmL	1652648..1653112 (-)	465	WP_003689916.1	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	-
KWZ00_RS08725 (KWZ00_08725)	-	1653177..1653902 (-)	726	WP_003694234.1	ComF family protein	-
KWZ00_RS08730 (KWZ00_08730)	bioH	1653901..1654650 (+)	750	WP_047918922.1	pimeloyl-ACP methyl ester esterase BioH	-
KWZ00_RS08735 (KWZ00_08735)	-	1654647..1655435 (+)	789	WP_010359260.1	class I SAM-dependent methyltransferase	-
KWZ00_RS08740 (KWZ00_08740)	-	1655516..1655623 (-)	108	Protein_1715	IS5/IS1182 family transposase	-

Sequence

Protein

• Length: 194 a.a.
• Molecular weight: 20829.12 Da
• Isoelectric Point: 7.2073

>NTDB_id=513627 KWZ00_RS08705 WP_003694238.1 1650781..1651365(-) (ruvA) [Neisseria gonorrhoeae strain O1G1370]
MISRLTGKLVEKNPPQIVIDVNGVGYEADVSMQTFYNLPPVGESVQLFTQLIIREDAHLLFGFATAEERKTFRQLIKVGG
IGAKTALGILSAMTADELARAVAEEDVKRLSSAPGIGKKTAERMVLELRGKLVAHTVTDRLFAASPAADETEDIVSTLLA
LGYNEREAKAAVKGVPKGTDVGEGVRLALKNLLK

Nucleotide

• Length: 585 bp

>NTDB_id=513627 KWZ00_RS08705 WP_003694238.1 1650781..1651365(-) (ruvA) [Neisseria gonorrhoeae strain O1G1370]
ATGATCAGCAGACTGACCGGCAAACTGGTTGAAAAAAACCCTCCGCAAATCGTCATCGATGTCAACGGTGTCGGTTATGA
AGCCGACGTATCGATGCAGACCTTCTACAACCTGCCGCCCGTGGGTGAAAGCGTACAACTGTTTACCCAGCTTATCATTC
GGGAAGACGCACATCTTTTATTTGGTTTTGCCACTGCGGAAGAACGCAAGACCTTCCGCCAACTGATTAAGGTCGGCGGC
ATCGGCGCGAAAACGGCTTTGGGCATTTTGTCGGCGATGACGGCAGACGAGCTGGCGCGGGCGGTTGCAGAAGAAGATGT
CAAACGCCTCTCCTCCGCTCCGGGAATCGGCAAAAAAACCGCCGAACGTATGGTCTTGGAACTGCGCGGCAAGCTGGTCG
CGCATACGGTAACGGACAGGCTGTTTGCCGCCTCACCCGCCGCCGACGAAACGGAAGACATCGTCAGCACGCTGCTTGCG
CTGGGTTACAACGAACGCGAGGCAAAAGCGGCGGTCAAAGGCGTTCCGAAGGGGACGGACGTGGGCGAAGGCGTGCGCCT
TGCCCTGAAAAACCTGCTGAAATAA

Domains

Predicted by InterProScan.

• Helix-hairpin-helix domain (HHH_5) (72-129)

• RuvA N terminal domain (RuvA_N) (1-62)

• RuvA, C-terminal domain (RuvA_C) (150-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Streptococcus pneumoniae TIGR4	37.5	100	0.387
ruvA	Streptococcus pneumoniae R6	37.5	100	0.387
ruvA	Streptococcus pneumoniae D39	37.5	100	0.387
ruvA	Bacillus subtilis subsp. subtilis str. 168	34.951	100	0.371