Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   I6G43_RS08845 Genome accession   NZ_CP065706
Coordinates   1840920..1841930 (-) Length   336 a.a.
NCBI ID   WP_038804599.1    Uniprot ID   A0A3R9K0P0
Organism   Streptococcus oralis strain FDAARGOS_886     
Function   regulate comCDE transcription and transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1835920..1846930
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6G43_RS08820 (I6G43_08820) - 1836153..1837367 (-) 1215 WP_000666480.1 pyridoxal phosphate-dependent aminotransferase -
  I6G43_RS08825 (I6G43_08825) - 1837512..1837811 (-) 300 WP_038805805.1 hypothetical protein -
  I6G43_RS08830 (I6G43_08830) - 1837978..1838430 (+) 453 WP_000079159.1 universal stress protein -
  I6G43_RS08835 (I6G43_08835) - 1838466..1839851 (-) 1386 WP_000453130.1 Cof-type HAD-IIB family hydrolase -
  I6G43_RS08840 (I6G43_08840) - 1839917..1840879 (+) 963 WP_001124804.1 asparaginase -
  I6G43_RS08845 (I6G43_08845) ccpA 1840920..1841930 (-) 1011 WP_038804599.1 catabolite control protein A Regulator
  I6G43_RS08850 (I6G43_08850) - 1842140..1842457 (+) 318 WP_038805930.1 DUF960 domain-containing protein -
  I6G43_RS08855 (I6G43_08855) - 1842508..1843791 (-) 1284 WP_001125353.1 DUF308 domain-containing protein -
  I6G43_RS08860 (I6G43_08860) folK 1843784..1844605 (-) 822 WP_000372501.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  I6G43_RS08865 (I6G43_08865) folE 1844648..1845202 (-) 555 WP_000380934.1 GTP cyclohydrolase I FolE -
  I6G43_RS08870 (I6G43_08870) - 1845183..1846505 (-) 1323 WP_000659084.1 bifunctional folylpolyglutamate synthase/dihydrofolate synthase -

Sequence


Protein


Download         Length: 336 a.a.        Molecular weight: 37215.31 Da        Isoelectric Point: 5.4980

>NTDB_id=513245 I6G43_RS08845 WP_038804599.1 1840920..1841930(-) (ccpA) [Streptococcus oralis strain FDAARGOS_886]
MNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNITNGYFS
TLAKGIDDIAEMYKYNIVLANSDEDDEKEVSVVNTLFSKQVDGIIFMGYHLTEKIRSEFSRSRTPVVLAGTVDIEHQLPS
VNIDYKQATIDAVTHLLQENEKIAFVSGPLVDDINGKIRLIGYKEALKKAGIPYSEGLVFESKYSYNDGYALAERLVSSQ
ATAAVVTGDELAAGVLNGLADHGISVPEEFEIITTDDSQIARFTRPNLTTIAQPLYDLGAISMRMLTKIMHKEELEEREV
LLPHGLTERRSTRKRK

Nucleotide


Download         Length: 1011 bp        

>NTDB_id=513245 I6G43_RS08845 WP_038804599.1 1840920..1841930(-) (ccpA) [Streptococcus oralis strain FDAARGOS_886]
ATGAACACAGATGATACAGTAACGATTTATGATGTTGCCCGTGAAGCTGGGGTTTCAATGGCAACTGTTAGCCGTGTAGT
GAATGGCAATAAGAACGTCAAAGAGAATACTCGTAAAAAAGTTCTAGAGGTGATCGATCGTCTTGACTACCGTCCAAATG
CGGTAGCGCGTGGCTTGGCCAGCAAGAAAACCACGACAGTTGGTGTTGTGATTCCAAATATCACCAATGGCTATTTTTCA
ACCCTAGCCAAGGGGATTGATGATATTGCAGAGATGTATAAGTACAATATCGTCCTAGCCAACAGTGATGAAGACGATGA
AAAAGAAGTTTCAGTAGTTAATACTCTCTTTTCAAAACAAGTTGATGGTATTATCTTTATGGGCTATCACTTGACTGAAA
AGATTCGTTCAGAATTTTCTCGTTCTCGGACACCAGTTGTCCTTGCAGGAACGGTGGATATCGAACACCAGTTGCCAAGT
GTTAATATTGACTACAAACAAGCAACGATTGATGCAGTAACTCATTTGCTTCAGGAAAATGAAAAGATTGCCTTTGTCAG
CGGGCCACTTGTTGATGATATCAACGGCAAAATTCGATTGATTGGTTACAAGGAAGCTTTGAAAAAGGCAGGAATCCCTT
ATAGCGAGGGCTTGGTATTTGAGTCTAAATACAGCTATAATGATGGCTATGCCTTGGCAGAGCGCTTGGTTTCTTCACAG
GCTACAGCTGCAGTTGTGACAGGTGATGAATTGGCTGCGGGTGTGTTAAATGGCTTGGCAGATCACGGTATTTCTGTACC
GGAAGAGTTTGAAATCATCACGACAGATGATTCTCAAATTGCACGATTCACTCGTCCAAACTTGACTACTATTGCCCAAC
CTCTTTATGACCTAGGCGCTATCAGCATGCGTATGTTGACCAAGATTATGCATAAGGAAGAGTTGGAAGAACGTGAAGTT
CTCCTGCCTCACGGTTTGACAGAACGCCGTTCGACACGAAAACGCAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A3R9K0P0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus pneumoniae D39

92.262

100

0.923

  ccpA Streptococcus gordonii str. Challis substr. CH1

86.826

99.405

0.863

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

57.704

98.512

0.568