Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA   Type   Regulator
Locus tag   I6G43_RS07625 Genome accession   NZ_CP065706
Coordinates   1579788..1581746 (-) Length   652 a.a.
NCBI ID   WP_000748531.1    Uniprot ID   A0A7T3DUQ4
Organism   Streptococcus oralis strain FDAARGOS_886     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 1574788..1586746
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6G43_RS07615 (I6G43_07615) - 1577374..1578540 (-) 1167 WP_000521346.1 MalY/PatB family protein -
  I6G43_RS07620 (I6G43_07620) - 1578548..1579642 (-) 1095 WP_000031983.1 cystathionine gamma-synthase -
  I6G43_RS07625 (I6G43_07625) amiA 1579788..1581746 (-) 1959 WP_000748531.1 peptide ABC transporter substrate-binding protein Regulator
  I6G43_RS09510 - 1582205..1582618 (-) 414 WP_415843877.1 LPXTG cell wall anchor domain-containing protein -
  I6G43_RS09515 - 1582854..1584425 (+) 1572 WP_415843859.1 hypothetical protein -
  I6G43_RS09520 - 1584817..1584957 (+) 141 WP_415843860.1 hypothetical protein -
  I6G43_RS09525 - 1584967..1585293 (+) 327 WP_415843861.1 hypothetical protein -
  I6G43_RS09530 - 1585573..1585713 (+) 141 WP_415843860.1 hypothetical protein -
  I6G43_RS09535 - 1585723..1586049 (+) 327 WP_415843862.1 hypothetical protein -
  I6G43_RS09540 - 1586395..1586571 (+) 177 WP_415843863.1 hypothetical protein -

Sequence

Protein


Download         Length: 652 a.a.        Molecular weight: 72751.94 Da        Isoelectric Point: 4.7373

>NTDB_id=513234 I6G43_RS07625 WP_000748531.1 1579788..1581746(-) (amiA) [Streptococcus oralis strain FDAARGOS_886]
MKKSKAKYLTLAGVVLSAGILLSACGNSASSSKTYNYVYSSDPSSLNYLAENRATTNDIVTNLVDGLMENDQYGNYVPSL
AEDWTVSKDGLTYTYKLRKDAKWYTYEGEEYAPVTAQDFVTGLKYAADKKSEALYLVQDSVAGLDDYINGKTTDFSTVGV
KAIDDQTVQYTLTRPESYWNSKTTSTILFPVNADFLKSKGDDFGKVDPSSILYNGPFLMKSFVSKSVIEYKKNPNYWDAK
NVFVDDVKLTYYDGSDQDALARNFVEGVYSYARLYPNSSSFEGIKEKNKDNIIYSMQTATSYYLNFNLDRKSYNFTSKSS
DIEKKSTQEAVLNKNFRQAFNYAYNRTAYGAQSQGEDGATKIIRNLVVPPTFVSINGKDFGDVVSEKMVNYGQEWQGINF
ADAQDPYYNPDKAKAKFAEAKKELEAKGVQFPIHLDVSVDQSAKKGVLEASSLKQSIESVLGAENVVIDIQQLSTDDFDN
SSYLAQTAAQKDFDIYNGGWSADYLDPSSYLDILNVNNGGMLQNLGLEPGEVNDKAKAVGLDTYTEMLEEANKEQDPAKR
YEKYAEIQAWLVDSALAIPNVSLGGTPSLRKTVPFSAPFSQAGNKGVESYKYLKLQDKTVTADEYEKAKEKWLKEKEESN
KKAQEELAKHVK

Nucleotide


Download         Length: 1959 bp        

>NTDB_id=513234 I6G43_RS07625 WP_000748531.1 1579788..1581746(-) (amiA) [Streptococcus oralis strain FDAARGOS_886]
ATGAAAAAGTCTAAGGCCAAGTATCTGACACTGGCAGGTGTCGTGTTAAGCGCAGGTATCCTATTGAGCGCATGTGGGAA
CTCAGCAAGTTCATCTAAAACATATAACTATGTCTATTCTAGTGATCCATCTAGTTTGAACTATCTAGCAGAGAACCGTG
CAACAACCAATGATATCGTTACCAATCTGGTAGATGGTTTGATGGAAAATGACCAATATGGTAACTATGTCCCATCTTTG
GCAGAGGATTGGACTGTTTCCAAGGATGGTTTGACTTATACCTACAAACTTCGTAAAGATGCCAAGTGGTATACATACGA
AGGTGAAGAATACGCACCTGTAACTGCTCAAGACTTTGTGACAGGTTTGAAATATGCTGCTGATAAAAAATCCGAAGCCT
TGTACCTGGTTCAAGACTCTGTAGCAGGTTTGGATGACTATATCAACGGTAAAACAACTGACTTTTCAACTGTCGGTGTG
AAGGCGATTGATGACCAAACAGTTCAGTACACTTTGACACGTCCAGAATCTTATTGGAACTCTAAAACAACTTCAACCAT
TCTCTTCCCTGTCAATGCAGATTTCTTGAAATCAAAAGGGGATGATTTTGGTAAGGTAGACCCTTCTAGCATTTTGTACA
ATGGACCTTTCTTGATGAAATCATTTGTTTCAAAATCTGTTATCGAATACAAGAAAAATCCGAACTACTGGGATGCTAAA
AATGTCTTTGTGGACGATGTGAAATTGACTTACTATGATGGTAGTGACCAAGATGCCCTAGCTCGTAACTTTGTAGAAGG
AGTCTACAGCTACGCGCGTCTCTATCCAAATAGCTCAAGTTTTGAAGGAATTAAAGAGAAGAACAAGGATAACATCATCT
ATAGTATGCAAACCGCAACTTCTTATTACTTGAACTTCAACTTGGACAGAAAATCTTATAACTTCACTTCTAAGTCCTCA
GATATCGAAAAGAAATCAACACAAGAAGCAGTTCTGAATAAAAACTTCCGTCAAGCCTTCAACTATGCTTATAACCGTAC
AGCCTATGGAGCTCAATCTCAAGGAGAAGACGGAGCAACGAAGATTATTCGTAACCTAGTGGTACCTCCTACATTTGTAA
GTATCAACGGAAAAGACTTTGGCGATGTTGTTTCAGAAAAGATGGTCAACTATGGTCAAGAATGGCAAGGAATCAACTTT
GCAGACGCGCAAGATCCATACTACAATCCTGACAAGGCTAAAGCTAAATTTGCAGAAGCTAAGAAAGAATTGGAAGCTAA
GGGTGTGCAATTCCCAATTCACTTGGATGTATCAGTTGACCAATCAGCTAAAAAAGGTGTACTTGAAGCAAGTTCTTTAA
AACAATCCATCGAATCTGTTCTAGGAGCTGAGAATGTGGTTATTGATATCCAACAATTATCAACAGATGACTTCGATAAT
TCTAGCTACCTCGCTCAAACGGCAGCTCAAAAAGACTTTGATATCTATAATGGCGGTTGGAGTGCTGACTACTTGGATCC
ATCAAGCTATCTAGATATCCTAAATGTCAATAACGGCGGTATGTTGCAAAACCTTGGTCTAGAACCAGGTGAGGTCAATG
ACAAGGCTAAGGCAGTTGGACTTGATACCTATACTGAAATGTTGGAAGAAGCCAATAAAGAGCAGGATCCAGCGAAACGT
TATGAAAAATATGCTGAAATTCAAGCTTGGCTCGTTGATAGCGCCCTTGCAATTCCAAACGTTTCCCTTGGTGGAACACC
TAGCTTGAGAAAGACAGTTCCATTCTCAGCACCATTCTCACAAGCAGGAAATAAGGGTGTGGAATCATACAAGTACCTCA
AGTTACAAGATAAGACTGTAACGGCTGATGAGTATGAAAAAGCTAAAGAAAAATGGCTGAAAGAAAAAGAAGAATCAAAT
AAGAAAGCTCAAGAAGAATTGGCAAAACACGTTAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(76-519)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7T3DUQ4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA Streptococcus salivarius strain HSISS4

56.535

100

0.571
  amiA3 Streptococcus thermophilus LMG 18311

56.449

100

0.571
  amiA3 Streptococcus thermophilus LMD-9

56.146

100

0.567