Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   I6G67_RS14030 Genome accession   NZ_CP065666
Coordinates   2796557..2796955 (-) Length   132 a.a.
NCBI ID   WP_004692306.1    Uniprot ID   A0A380U974
Organism   Acinetobacter johnsonii strain FDAARGOS_910     
Function   dsDNA binding (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2791557..2801955
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6G67_RS14000 (I6G67_14000) - 2791630..2791899 (-) 270 WP_010325935.1 HPr family phosphocarrier protein -
  I6G67_RS14005 (I6G67_14005) rapZ 2791896..2792747 (-) 852 WP_004692298.1 RNase adapter RapZ -
  I6G67_RS14010 (I6G67_14010) panC 2792774..2793616 (-) 843 WP_004692300.1 pantoate--beta-alanine ligase -
  I6G67_RS14015 (I6G67_14015) panB 2793620..2794429 (-) 810 WP_004692301.1 3-methyl-2-oxobutanoate hydroxymethyltransferase -
  I6G67_RS14020 (I6G67_14020) folK 2794466..2794954 (-) 489 WP_004692303.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  I6G67_RS14025 (I6G67_14025) pcnB 2794951..2796420 (-) 1470 WP_004692305.1 polynucleotide adenylyltransferase PcnB -
  I6G67_RS14030 (I6G67_14030) comEA 2796557..2796955 (-) 399 WP_004692306.1 ComEA family DNA-binding protein Machinery gene
  I6G67_RS14035 (I6G67_14035) mazG 2796974..2797735 (-) 762 WP_004692307.1 nucleoside triphosphate pyrophosphohydrolase -
  I6G67_RS14040 (I6G67_14040) - 2797854..2798621 (+) 768 WP_004692309.1 SDR family oxidoreductase -
  I6G67_RS14045 (I6G67_14045) - 2798661..2800967 (-) 2307 WP_004692310.1 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14655.11 Da        Isoelectric Point: 10.8498

>NTDB_id=512794 I6G67_RS14030 WP_004692306.1 2796557..2796955(-) (comEA) [Acinetobacter johnsonii strain FDAARGOS_910]
MIKIKVSLLIIALLLLSLLAWIPSSYAQSFDQNYLNWKTEQQAWDDRIQAPKSVKRAVSPVQAQPVSSANKISLNQASVD
QLQQLQGVGLKKAQAIVAYRQKQGPFKSIDELQQVRGIGPAIFAKNKTRLGL

Nucleotide


Download         Length: 399 bp        

>NTDB_id=512794 I6G67_RS14030 WP_004692306.1 2796557..2796955(-) (comEA) [Acinetobacter johnsonii strain FDAARGOS_910]
TTGATAAAAATAAAAGTAAGTTTGTTGATCATTGCGTTGTTATTACTGAGTTTACTGGCTTGGATACCCAGTAGTTATGC
ACAGTCTTTTGATCAGAACTACCTGAACTGGAAAACAGAGCAGCAGGCCTGGGATGATCGTATTCAAGCCCCTAAAAGCG
TGAAACGTGCTGTGTCTCCTGTTCAGGCCCAACCTGTGTCGAGTGCAAATAAAATTAGTTTAAATCAAGCCAGTGTCGAT
CAGTTACAGCAGCTTCAGGGTGTGGGTCTAAAAAAGGCACAGGCAATCGTGGCCTATCGCCAGAAACAAGGGCCATTTAA
GAGCATAGATGAGCTACAACAGGTGCGCGGGATTGGACCGGCAATTTTTGCAAAAAATAAAACCCGTTTGGGCTTGTGA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(68-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A380U974

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Acinetobacter baumannii strain A118

53.279

92.424

0.492
  comEA Acinetobacter baumannii D1279779

51.613

93.939

0.485
  comEA Acinetobacter baylyi ADP1

46.729

81.061

0.379