Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilP   Type   Machinery gene
Locus tag   I6G67_RS01105 Genome accession   NZ_CP065666
Coordinates   210092..210619 (+) Length   175 a.a.
NCBI ID   WP_004691496.1    Uniprot ID   A0A2W5RPS2
Organism   Acinetobacter johnsonii strain FDAARGOS_910     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 205092..215619
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6G67_RS01090 (I6G67_01090) pilM 207659..208717 (+) 1059 WP_004691499.1 pilus assembly protein PilM Machinery gene
  I6G67_RS01095 (I6G67_01095) pilN 208717..209373 (+) 657 WP_004691498.1 PilN domain-containing protein Machinery gene
  I6G67_RS01100 (I6G67_01100) pilO 209370..210092 (+) 723 WP_004691497.1 type 4a pilus biogenesis protein PilO Machinery gene
  I6G67_RS01105 (I6G67_01105) pilP 210092..210619 (+) 528 WP_004691496.1 pilus assembly protein PilP Machinery gene
  I6G67_RS01110 (I6G67_01110) pilQ 210639..212717 (+) 2079 WP_004691495.1 type IV pilus secretin PilQ Machinery gene
  I6G67_RS01115 (I6G67_01115) aroK 212755..213288 (+) 534 WP_004691494.1 shikimate kinase AroK -
  I6G67_RS01120 (I6G67_01120) aroB 213319..214404 (+) 1086 WP_004691493.1 3-dehydroquinate synthase -
  I6G67_RS01125 (I6G67_01125) - 214412..215251 (+) 840 WP_017397246.1 hypothetical protein -

Sequence

Protein


Download         Length: 175 a.a.        Molecular weight: 19385.59 Da        Isoelectric Point: 7.1331

>NTDB_id=512772 I6G67_RS01105 WP_004691496.1 210092..210619(+) (pilP) [Acinetobacter johnsonii strain FDAARGOS_910]
MKYQNLMLSLCVGLFLIGCDSRIDAVNMQMAEIRNQPPLPIEPAPDFPPVPTFNYAAHQLKSPFMPSSLAAELKIMAGKR
VYPNLSRQLQPLESYAIESLNMKGSMRGQNGQILALIQTPDGEIERVQRGSYLGMNHGRVINITATQIDLIEIIPDGREG
YVERPRSLVLIGPAP

Nucleotide


Download         Length: 528 bp        

>NTDB_id=512772 I6G67_RS01105 WP_004691496.1 210092..210619(+) (pilP) [Acinetobacter johnsonii strain FDAARGOS_910]
ATGAAATATCAAAATCTCATGCTTAGTCTCTGCGTTGGACTATTCCTTATCGGTTGTGATTCACGTATTGATGCGGTCAA
TATGCAAATGGCTGAAATTCGTAATCAGCCACCATTGCCGATTGAACCTGCGCCAGATTTCCCACCTGTACCGACTTTTA
ATTATGCCGCGCATCAATTAAAAAGTCCGTTTATGCCAAGCTCATTAGCGGCTGAACTGAAAATTATGGCTGGAAAGCGT
GTTTATCCAAACTTATCTCGCCAATTACAACCCTTGGAAAGTTATGCGATTGAATCGCTTAACATGAAAGGCAGCATGCG
TGGACAAAATGGACAAATTTTGGCGTTGATTCAAACCCCTGATGGTGAAATTGAACGCGTGCAGCGTGGTAGTTATTTGG
GGATGAATCATGGTCGTGTGATTAATATCACCGCTACACAAATTGATTTGATTGAAATTATTCCGGATGGGCGTGAGGGC
TATGTCGAGCGCCCGAGAAGCCTAGTATTAATTGGGCCGGCGCCTTAA

Domains

Predicted by InterproScan.

Pilus assembly protein, PilP (PilP)

(29-170)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2W5RPS2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilP Acinetobacter baumannii D1279779

76.571

100

0.766
  comL Acinetobacter baylyi ADP1

71.429

100

0.714