Detailed information NTG0051132

Bioinformatically predicted

Overview

• Name: pptB
• Type: Regulator
• Locus tag: SIR_RS16930
• Genome accession: NC_022246
• Coordinates: 1485570..1486616 (-)
• Length: 348 a.a.
• NCBI ID: WP_021003113.1
• Uniprot ID: T1ZFZ6
• Organism: Streptococcus intermedius B196
• Function: export ComS (predicted from homology) Competence regulation

Genomic Context

Location: 1480570..1491616

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SIR_RS16900 (SIR_1408)	rnpM	1480747..1481043 (-)	297	WP_003078278.1	RNase P modulator RnpM	-
SIR_RS16905 (SIR_1409)	nusA	1481054..1482247 (-)	1194	WP_003078357.1	transcription termination factor NusA	-
SIR_RS16910 (SIR_1410)	rimP	1482301..1482789 (-)	489	WP_006269953.1	ribosome maturation factor RimP	-
SIR_RS16915 (SIR_1411)	-	1482997..1483689 (-)	693	WP_003073834.1	VIT family protein	-
SIR_RS16920 (SIR_1412)	trmB	1484090..1484725 (-)	636	WP_003078354.1	tRNA (guanosine(46)-N7)-methyltransferase TrmB	-
SIR_RS16925 (SIR_1413)	ccrZ	1484722..1485519 (-)	798	WP_003073837.1	cell cycle regulator CcrZ	-
SIR_RS16930 (SIR_1414)	pptB	1485570..1486616 (-)	1047	WP_021003113.1	ABC transporter permease	Regulator
SIR_RS16935 (SIR_1415)	pptA	1486613..1487344 (-)	732	WP_021003114.1	ABC transporter ATP-binding protein	Regulator
SIR_RS16940 (SIR_1416)	-	1487413..1487823 (+)	411	WP_003073842.1	HIT family protein	-
SIR_RS16945 (SIR_1417)	-	1487833..1488120 (+)	288	WP_003078430.1	hypothetical protein	-
SIR_RS16950 (SIR_1418)	brpA	1488164..1489267 (-)	1104	WP_003073846.1	biofilm formation/cell division transcriptional regulator BrpA	-
SIR_RS16955 (SIR_1419)	-	1489275..1489796 (-)	522	WP_003073848.1	GNAT family N-acetyltransferase	-
SIR_RS16960 (SIR_1420)	tsaE	1489789..1490229 (-)	441	WP_009568047.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	-

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 40842.22 Da
• Isoelectric Point: 10.3580

>NTDB_id=51132 SIR_RS16930 WP_021003113.1 1485570..1486616(-) (pptB) [Streptococcus intermedius B196]
MKEVFQKRKQVFRNQCLKYSRYVFNDHFVLFLLVFIGFLAVQYSQLLRNFPKNHLPIILALAVLLVFLLPLGRIATYMEK
PDSLFLLVKEEELKSYLQKQMCSSYLLWSVFQTAILLLAAPLLLALGLPFWGWFILVFFMLIAKWFLFLKKSQRFYQGAG
INWGYLIDYEERRKQTILRFFALFTNVKGISNSVKRRAYLDSLTNILPKRQSTTWQNMFLRSYLRNGDFLALTMRLLFLS
LLGIGLLGQSWIAAVFVILLNYLLLFQLTALYNAFDYQYLTFLFPLEIGLKLKGVRQVIVLVGYNVLLVETIMALLFFQD
RVALLFMVGVTLLLYFFYLPVKLKSLVD

Nucleotide

• Length: 1047 bp

>NTDB_id=51132 SIR_RS16930 WP_021003113.1 1485570..1486616(-) (pptB) [Streptococcus intermedius B196]
ATGAAAGAAGTGTTTCAAAAGCGCAAGCAAGTATTTCGCAATCAATGTTTGAAATATTCACGCTATGTTTTTAACGATCA
TTTTGTTCTATTTTTATTAGTTTTTATTGGCTTTTTAGCTGTTCAATATAGTCAACTGTTGCGAAATTTTCCTAAAAATC
ACCTGCCAATTATTCTTGCTTTAGCAGTTCTTTTGGTGTTCTTGTTGCCTTTGGGAAGAATTGCAACGTATATGGAAAAG
CCAGATAGTCTATTTTTGTTGGTCAAAGAAGAAGAATTAAAAAGTTATTTACAAAAACAAATGTGTTCATCTTATCTATT
ATGGAGTGTATTTCAAACGGCTATTCTATTACTAGCAGCGCCACTCCTTTTGGCGCTAGGATTACCATTTTGGGGATGGT
TTATTCTTGTATTTTTTATGTTAATAGCAAAATGGTTTCTATTTTTGAAAAAGAGCCAAAGATTTTATCAAGGAGCAGGC
ATAAATTGGGGCTATCTCATTGACTACGAAGAGAGACGAAAGCAGACAATCTTGCGTTTCTTTGCTCTATTTACCAATGT
AAAAGGAATCTCCAATAGCGTGAAACGCCGAGCCTATCTTGATAGTTTGACGAATATTTTGCCAAAAAGGCAATCAACCA
CTTGGCAGAATATGTTTTTACGCTCTTATTTGCGAAATGGTGATTTTCTGGCTTTGACCATGCGGTTGCTATTTCTATCT
CTTTTAGGAATTGGCTTGCTCGGTCAATCTTGGATTGCGGCTGTTTTTGTGATACTGTTGAATTATCTTTTGCTATTTCA
ATTGACCGCTTTGTACAACGCTTTTGATTATCAATATTTGACATTCTTATTTCCTCTAGAAATCGGATTAAAGTTAAAGG
GTGTGAGACAAGTGATTGTTCTTGTTGGTTACAATGTGCTGTTAGTTGAGACAATTATGGCGTTGCTATTTTTCCAAGAT
AGAGTTGCACTGCTTTTCATGGTAGGAGTTACACTATTGCTTTATTTTTTCTATTTACCAGTTAAATTAAAAAGTTTGGT
TGACTAA

Domains

Predicted by InterProScan.

• Bacterial ABC transporter protein EcsB (EcsB) (160-329)

• Bacterial ABC transporter protein EcsB (EcsB) (2-157)

3D structure

• AlphaFold DB: T1ZFZ6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pptB	Streptococcus thermophilus LMD-9	47.414	100	0.474
pptB	Streptococcus salivarius strain HSISS4	46.552	100	0.466