Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   STT55_RS05585 Genome accession   NZ_CP065502
Coordinates   1060811..1061623 (-) Length   270 a.a.
NCBI ID   WP_011681204.1    Uniprot ID   A0AAP2RND8
Organism   Streptococcus thermophilus strain ST55     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1055811..1066623
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STT55_RS05560 (STT55_05520) - 1056854..1057240 (-) 387 WP_002953113.1 DUF1934 domain-containing protein -
  STT55_RS05565 - 1057298..1058105 (-) 808 Protein_1041 GNAT family N-acetyltransferase -
  STT55_RS05570 (STT55_05525) yidA 1058313..1059122 (+) 810 WP_011226081.1 sugar-phosphatase -
  STT55_RS05575 (STT55_05530) - 1059124..1060338 (+) 1215 WP_173940373.1 aminoacyltransferase -
  STT55_RS05580 (STT55_05535) - 1060390..1060751 (-) 362 Protein_1044 YbaN family protein -
  STT55_RS05585 (STT55_05540) vicX 1060811..1061623 (-) 813 WP_011681204.1 MBL fold metallo-hydrolase Regulator
  STT55_RS05590 (STT55_05545) vicK 1061629..1062969 (-) 1341 WP_232979188.1 cell wall metabolism sensor histidine kinase VicK Regulator
  STT55_RS05595 (STT55_05550) vicR 1062962..1063669 (-) 708 WP_173940375.1 response regulator YycF Regulator
  STT55_RS05600 (STT55_05555) - 1064196..1064963 (+) 768 WP_173940376.1 amino acid ABC transporter ATP-binding protein -
  STT55_RS05605 (STT55_05560) - 1064975..1065808 (+) 834 WP_022096756.1 transporter substrate-binding domain-containing protein -
  STT55_RS05610 (STT55_05565) - 1065826..1066524 (+) 699 WP_022096755.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 270 a.a.        Molecular weight: 30045.01 Da        Isoelectric Point: 5.5779

>NTDB_id=511257 STT55_RS05585 WP_011681204.1 1060811..1061623(-) (vicX) [Streptococcus thermophilus strain ST55]
MTSELGFKYSILASGSTGNSFYLETPEKKILVDAGLSGKKITSLLAEIDRDPSDLDAILVTHEHKDHIHGVGVLARKYGM
DIYANEKTWQIMDSKNMLGKVDNSQKHIFSRGKLLTFGDIDIESFGVSHDAIDPQFYRFMKDGKSFVMLTDTGYVSDRMA
GLIENADGYLIESNHDIEILRAGSYPWSTKQRILSDQGHLCNEDGADAMIRTIGNKTKKIYLGHLSKENNIKELAYMTME
NQLARADFGVGTDFKIFGTSPDTATPLTDI

Nucleotide


Download         Length: 813 bp        

>NTDB_id=511257 STT55_RS05585 WP_011681204.1 1060811..1061623(-) (vicX) [Streptococcus thermophilus strain ST55]
ATGACCTCAGAATTAGGGTTTAAATATAGTATTTTGGCTTCAGGGTCAACCGGGAATTCCTTTTATTTGGAAACTCCAGA
AAAGAAGATTCTAGTGGATGCTGGTTTATCAGGAAAAAAAATTACAAGTTTGCTAGCGGAGATTGACCGTGATCCAAGTG
ATCTTGATGCTATCTTAGTAACACATGAACACAAGGACCATATCCATGGTGTAGGTGTTTTAGCTCGTAAATACGGCATG
GATATATACGCCAATGAGAAAACCTGGCAAATTATGGATAGTAAGAATATGCTAGGTAAGGTTGATAATAGTCAGAAACA
TATTTTTTCTCGCGGTAAGCTTCTAACCTTTGGTGATATCGACATTGAATCTTTCGGAGTTAGTCATGATGCCATTGATC
CACAATTTTACCGCTTTATGAAAGACGGAAAGAGCTTTGTCATGTTGACGGATACAGGCTATGTTTCAGACCGTATGGCT
GGTCTTATTGAAAATGCTGATGGCTATCTGATTGAATCTAATCATGATATTGAAATCTTGAGAGCAGGTTCTTATCCTTG
GTCAACCAAGCAACGTATCCTCTCTGATCAGGGTCACTTGTGTAATGAGGATGGAGCCGATGCTATGATTCGTACCATCG
GTAATAAAACTAAAAAGATTTATCTGGGTCACCTTTCTAAAGAAAATAATATCAAGGAATTGGCCTACATGACGATGGAA
AATCAGTTGGCTCGCGCTGACTTTGGTGTTGGAACTGACTTTAAGATTTTTGGTACCTCACCAGATACGGCGACCCCACT
AACAGATATTTAG

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(29-214)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

77.985

99.259

0.774