Detailed information NTG0051121

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: SPAF_RS02805
• Genome accession: NC_017905
• Coordinates: 550516..551442 (+)
• Length: 308 a.a.
• NCBI ID: WP_041826241.1
• Uniprot ID: -
• Organism: Streptococcus parasanguinis FW213
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 545516..556442

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SPAF_RS02790 (Spaf_0530)	amiC	547001..548500 (+)	1500	WP_014712957.1	ABC transporter permease	Regulator
SPAF_RS02795 (Spaf_0531)	amiD	548500..549426 (+)	927	WP_003010290.1	oligopeptide ABC transporter permease OppC	Regulator
SPAF_RS02800 (Spaf_0532)	amiE	549438..550505 (+)	1068	WP_014712958.1	ABC transporter ATP-binding protein	Regulator
SPAF_RS02805 (Spaf_0533)	amiF	550516..551442 (+)	927	WP_041826241.1	ATP-binding cassette domain-containing protein	Regulator
SPAF_RS10445	-	551479..552663 (-)	1185	Protein_511	transposase	-

Sequence

Protein

• Length: 308 a.a.
• Molecular weight: 35017.05 Da
• Isoelectric Point: 6.4378

>NTDB_id=51121 SPAF_RS02805 WP_041826241.1 550516..551442(+) (amiF) [Streptococcus parasanguinis FW213]
MTEKLVEIKDLEISFGEGSKKFVAVKNANFFINKGETFSLVGESGSGKTTIGRAIIGLNDTSAGEIIYDGRKINGKNSHS
EKSELIRKIQMIFQDPAASLNERATVDYIISEGLINHHLFNSEEERQEKVKNIMHEVGLLAEHLTRYPHEFSGGQRQRIG
IARALVMEPEFVIADEPISALDVSVRAQVLNLLKKFQRELGLTYLFIAHDLSVVRFISDRIAVIYKGVIVEVAETEELFN
HPIHPYTQSLLSAVPIPDPILERKKVLKIYDPEKHDYSEDKPQMVEIKPGHYVWANKAEENKYRQEYK

Nucleotide

• Length: 927 bp

>NTDB_id=51121 SPAF_RS02805 WP_041826241.1 550516..551442(+) (amiF) [Streptococcus parasanguinis FW213]
ATGACTGAAAAATTAGTTGAAATTAAAGATTTAGAAATTTCCTTCGGTGAAGGAAGTAAAAAATTCGTTGCTGTTAAAAA
CGCCAACTTCTTCATTAATAAGGGAGAAACTTTCTCTCTTGTTGGTGAATCAGGAAGTGGGAAGACAACAATTGGACGTG
CGATCATCGGTTTGAATGATACAAGTGCTGGAGAAATTATTTATGACGGTCGCAAGATCAATGGAAAAAACTCTCATAGT
GAAAAATCAGAGTTGATCCGTAAAATTCAAATGATCTTCCAAGACCCAGCAGCAAGTCTGAATGAACGTGCAACAGTTGA
TTATATTATCTCTGAAGGTTTGATCAATCACCATTTGTTTAACAGTGAAGAAGAACGTCAGGAAAAAGTAAAAAATATTA
TGCATGAAGTTGGGCTTCTTGCAGAACATTTGACACGTTACCCTCATGAATTCTCAGGTGGACAACGTCAACGGATCGGT
ATTGCCCGTGCACTTGTTATGGAACCAGAATTTGTCATTGCGGATGAACCAATCTCAGCCCTTGACGTTTCAGTACGTGC
GCAGGTCTTGAACCTTTTGAAAAAATTCCAAAGAGAATTAGGCTTGACCTACCTCTTTATCGCCCATGACTTGTCAGTTG
TGCGCTTCATTTCTGACCGTATTGCAGTTATCTATAAAGGGGTTATTGTAGAAGTAGCAGAAACTGAAGAGCTATTTAAC
CACCCAATCCATCCATATACTCAATCCCTACTTTCAGCGGTCCCAATTCCAGATCCAATTCTAGAACGTAAAAAAGTTCT
AAAAATTTATGATCCGGAAAAACATGATTATTCTGAAGATAAACCACAAATGGTTGAAATTAAACCAGGTCATTATGTAT
GGGCTAACAAAGCTGAAGAAAACAAATACAGACAAGAATATAAATAG

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (230-262)

• ABC transporter (ABC_tran) (25-178)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus salivarius strain HSISS4	84.314	99.351	0.838
amiF	Streptococcus thermophilus LMG 18311	83.987	99.351	0.834
amiF	Streptococcus thermophilus LMD-9	83.66	99.351	0.831