Detailed information NTG0511030

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: STCNRZ385_RS06895
• Genome accession: NZ_CP065495
• Coordinates: 1335378..1336304 (-)
• Length: 308 a.a.
• NCBI ID: WP_084828982.1
• Uniprot ID: A0A0E2Q2N6
• Organism: Streptococcus thermophilus strain CNRZ385
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1330378..1341304

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
STCNRZ385_RS06865 (STCNRZ385_06870)	-	1330455..1331249 (-)	795	WP_011681412.1	HAD-IIB family hydrolase	-
STCNRZ385_RS06870 (STCNRZ385_06875)	-	1331434..1331811 (+)	378	WP_011681413.1	GntR family transcriptional regulator	-
STCNRZ385_RS06875 (STCNRZ385_06880)	-	1331816..1332514 (+)	699	WP_011226301.1	ABC transporter ATP-binding protein	-
STCNRZ385_RS06880 (STCNRZ385_06885)	-	1332526..1333311 (+)	786	WP_011681414.1	hypothetical protein	-
STCNRZ385_RS06885 (STCNRZ385_06890)	amiF	1333361..1334290 (-)	930	WP_082245810.1	ATP-binding cassette domain-containing protein	Regulator
STCNRZ385_RS06890 (STCNRZ385_06895)	amiE	1334283..1335368 (-)	1086	WP_084828981.1	ABC transporter ATP-binding protein	Regulator
STCNRZ385_RS06895 (STCNRZ385_06900)	amiD	1335378..1336304 (-)	927	WP_084828982.1	oligopeptide ABC transporter permease OppC	Regulator
STCNRZ385_RS06900 (STCNRZ385_06905)	amiC	1336304..1337797 (-)	1494	WP_180483348.1	ABC transporter permease	Regulator
STCNRZ385_RS06905 (STCNRZ385_06910)	amiA	1337859..1339826 (-)	1968	WP_180483350.1	peptide ABC transporter substrate-binding protein	Regulator
STCNRZ385_RS06910 (STCNRZ385_06915)	-	1340030..1340220 (-)	191	Protein_1304	IS3 family transposase	-
STCNRZ385_RS06915	-	1340214..1340624 (-)	411	Protein_1305	ATP-binding cassette domain-containing protein	-
STCNRZ385_RS06920	-	1340656..1340969 (-)	314	Protein_1306	TatD family hydrolase	-

Sequence

Protein

• Length: 308 a.a.
• Molecular weight: 34664.83 Da
• Isoelectric Point: 9.7054

>NTDB_id=511030 STCNRZ385_RS06895 WP_084828982.1 1335378..1336304(-) (amiD) [Streptococcus thermophilus strain CNRZ385]
MASIDKSKFQFVKRDDFASETIDAPSYSYWKSVMRQFFKKKSTVVMLGILIAIVLMSFIYPMFSKFDFNDVSKVNDFSLR
YVHPNAQYWFGTDGNGKSLFDSVWFGARNSILIAVIATFLNVIIGLLVGAVWGISKTFDMIMMEIYNIISNIPSLLVVIV
LTYSLGAGFWNMIFAMTVTGWIGIAYTIRIQIMRYRDLEYNLASRNLGTPTAKIVIKNIMPQLVSVIVTMASQLLPGFIS
YEAFLSYFGLGLPVTTPSLGRLISDYAQNVTVNAYLFWIPLTTLILVSLALFIIGQNLADASDPRTHR

Nucleotide

• Length: 927 bp

>NTDB_id=511030 STCNRZ385_RS06895 WP_084828982.1 1335378..1336304(-) (amiD) [Streptococcus thermophilus strain CNRZ385]
ATGGCTTCAATTGATAAAAGTAAGTTCCAATTTGTAAAGCGCGATGATTTTGCCTCTGAAACAATTGATGCACCGTCTTA
CTCATACTGGAAATCAGTGATGCGTCAATTTTTTAAAAAGAAATCAACAGTTGTAATGTTGGGAATCTTGATTGCTATTG
TTTTGATGAGTTTCATCTACCCAATGTTTTCTAAATTTGACTTCAATGATGTCTCAAAAGTAAATGATTTCAGTTTGCGT
TATGTACATCCAAACGCTCAATACTGGTTCGGTACTGACGGTAATGGTAAGTCTCTATTTGACAGTGTTTGGTTTGGGGC
TCGTAATTCTATCCTTATCGCTGTTATCGCTACCTTCCTGAATGTTATAATTGGTTTGCTTGTAGGTGCTGTTTGGGGGA
TTTCTAAGACCTTCGATATGATTATGATGGAAATCTACAACATCATCTCAAATATTCCCTCTCTCCTTGTGGTTATCGTC
TTGACTTACTCATTAGGTGCTGGTTTTTGGAATATGATTTTTGCCATGACCGTAACAGGTTGGATTGGTATTGCCTACAC
AATCCGTATTCAAATCATGCGTTATCGTGATTTGGAGTATAACTTGGCTTCTCGCAATTTGGGAACACCAACGGCTAAGA
TTGTGATTAAAAATATTATGCCACAACTTGTGTCAGTTATTGTAACCATGGCTAGTCAACTTTTGCCAGGATTTATCTCT
TATGAGGCCTTCCTTTCATACTTTGGTTTGGGTCTTCCTGTTACTACGCCTAGTCTTGGTCGTTTGATTTCAGACTATGC
ACAGAATGTTACAGTCAATGCCTATCTCTTCTGGATTCCATTGACTACCTTGATTCTTGTTTCTCTTGCTCTCTTTATTA
TTGGTCAAAACTTAGCGGATGCTAGTGACCCACGTACGCATAGATAG

Domains

Predicted by InterproScan.

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-71)

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (125-306)

3D structure

• AlphaFold DB: A0A0E2Q2N6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus thermophilus LMG 18311	99.026	100	0.99
amiD	Streptococcus thermophilus LMD-9	99.026	100	0.99
amiD	Streptococcus salivarius strain HSISS4	96.104	100	0.961