Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   ST90728_RS07740 Genome accession   NZ_CP065479
Coordinates   1501124..1502161 (-) Length   345 a.a.
NCBI ID   WP_179971023.1    Uniprot ID   A0A3G6K0A6
Organism   Streptococcus thermophilus strain 90728     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1496124..1507161
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ST90728_RS07715 (ST90728_07715) ilvD 1496392..1498095 (-) 1704 WP_002951651.1 dihydroxy-acid dehydratase -
  ST90728_RS07720 (ST90728_07720) - 1498223..1499404 (+) 1182 WP_347113935.1 NAD(P)/FAD-dependent oxidoreductase -
  ST90728_RS07730 (ST90728_07730) trmB 1499624..1500265 (-) 642 WP_002947526.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  ST90728_RS07735 (ST90728_07735) - 1500275..1501066 (-) 792 WP_002951667.1 phosphotransferase family protein -
  ST90728_RS07740 (ST90728_07740) pptB 1501124..1502161 (-) 1038 WP_179971023.1 ABC transporter permease Regulator
  ST90728_RS07745 (ST90728_07745) pptA 1502158..1502889 (-) 732 WP_002951673.1 ABC transporter ATP-binding protein Regulator
  ST90728_RS07750 (ST90728_07750) - 1502954..1503373 (+) 420 WP_002891660.1 HIT family protein -
  ST90728_RS07755 (ST90728_07755) - 1503370..1503669 (+) 300 WP_347113938.1 hypothetical protein -
  ST90728_RS07760 (ST90728_07760) - 1504230..1504451 (-) 222 WP_347113940.1 hypothetical protein -
  ST90728_RS07765 (ST90728_07765) - 1504470..1505105 (-) 636 WP_014727665.1 DUF4230 domain-containing protein -
  ST90728_RS07770 - 1505124..1505249 (-) 126 WP_011681534.1 hypothetical protein -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 40198.76 Da        Isoelectric Point: 10.5363

>NTDB_id=510142 ST90728_RS07740 WP_179971023.1 1501124..1502161(-) (pptB) [Streptococcus thermophilus strain 90728]
MIAELFKERSRRFTTRCAKYSRYVFNDHFILVLLFLLGFVLVQYSQLLRHFPKNPWAIILGLLVLCLLLPFWGNIATYLE
PADKHYLLVKEEEVLDHIKKATGCAFRFWVLIQTLIFILVVPLFLALGLPVWRVVLVAVAMAILKYFIFQKKAQPFYKQS
GLNWTDAIAAENKRQQSILKFFSLFTNVKGITSSVKRRGYLDGILKRTKKDKKYTWYNLYLRAFLRSGDYFALSLRLFAL
TLLVIFLVPEKWLAMVLVVVFDYLLLFQLTALKSHFAYQRMANLMPIGKDMQVSNLKRLINQIVLVMTLIQALCLFDLKF
SLILVGVMLVLSLVYLPAKLKKMID

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=510142 ST90728_RS07740 WP_179971023.1 1501124..1502161(-) (pptB) [Streptococcus thermophilus strain 90728]
ATGATAGCTGAGCTTTTTAAGGAGCGTAGCAGACGATTCACTACCCGTTGTGCTAAGTATAGTCGCTACGTCTTTAATGA
CCACTTTATCCTGGTTCTTCTTTTTTTGCTGGGTTTTGTCTTGGTTCAGTATAGCCAGTTGCTCCGACATTTTCCAAAGA
ATCCATGGGCCATCATTCTTGGCTTACTTGTGCTTTGTCTCTTACTGCCTTTTTGGGGCAATATTGCCACCTATTTAGAG
CCTGCAGACAAGCACTACCTCTTAGTTAAGGAAGAAGAGGTGCTAGACCATATTAAGAAGGCGACAGGGTGTGCTTTTAG
ATTTTGGGTGCTCATCCAGACCTTGATTTTTATCTTGGTCGTCCCACTCTTTCTGGCCTTGGGTCTTCCAGTTTGGAGAG
TTGTCCTTGTAGCCGTGGCTATGGCTATTCTTAAGTATTTTATTTTCCAAAAGAAAGCACAACCTTTTTATAAGCAGTCT
GGGTTGAATTGGACTGATGCTATTGCAGCGGAGAATAAACGACAACAATCAATCTTGAAGTTTTTCTCACTCTTTACCAA
TGTTAAGGGAATTACATCGAGTGTTAAACGCCGTGGCTATTTGGATGGCATTCTCAAGCGTACAAAGAAAGACAAGAAAT
ATACGTGGTACAACCTGTACCTGAGAGCCTTCTTACGTTCAGGAGATTACTTTGCCCTTAGCCTACGCCTTTTTGCTTTA
ACACTTTTGGTTATTTTTTTGGTTCCTGAAAAATGGCTGGCTATGGTACTTGTGGTTGTTTTTGACTATCTCTTACTCTT
CCAGCTCACAGCGCTTAAATCGCACTTTGCTTACCAAAGGATGGCCAACCTTATGCCAATTGGAAAAGACATGCAGGTGA
GCAATCTTAAGCGCTTGATTAATCAAATTGTCCTTGTAATGACACTGATTCAGGCTCTTTGTCTCTTTGACCTTAAATTT
AGCCTGATTTTAGTTGGAGTTATGCTAGTTTTGAGCCTTGTTTACCTACCAGCCAAGCTTAAGAAGATGATTGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A3G6K0A6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

98.256

99.71

0.98

  pptB Streptococcus salivarius strain HSISS4

92.733

99.71

0.925