Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   ST90728_RS07745 Genome accession   NZ_CP065479
Coordinates   1502158..1502889 (-) Length   243 a.a.
NCBI ID   WP_002951673.1    Uniprot ID   A0AAP2RM94
Organism   Streptococcus thermophilus strain 90728     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1497158..1507889
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ST90728_RS07720 (ST90728_07720) - 1498223..1499404 (+) 1182 WP_347113935.1 NAD(P)/FAD-dependent oxidoreductase -
  ST90728_RS07730 (ST90728_07730) trmB 1499624..1500265 (-) 642 WP_002947526.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  ST90728_RS07735 (ST90728_07735) - 1500275..1501066 (-) 792 WP_002951667.1 phosphotransferase family protein -
  ST90728_RS07740 (ST90728_07740) pptB 1501124..1502161 (-) 1038 WP_179971023.1 ABC transporter permease Regulator
  ST90728_RS07745 (ST90728_07745) pptA 1502158..1502889 (-) 732 WP_002951673.1 ABC transporter ATP-binding protein Regulator
  ST90728_RS07750 (ST90728_07750) - 1502954..1503373 (+) 420 WP_002891660.1 HIT family protein -
  ST90728_RS07755 (ST90728_07755) - 1503370..1503669 (+) 300 WP_347113938.1 hypothetical protein -
  ST90728_RS07760 (ST90728_07760) - 1504230..1504451 (-) 222 WP_347113940.1 hypothetical protein -
  ST90728_RS07765 (ST90728_07765) - 1504470..1505105 (-) 636 WP_014727665.1 DUF4230 domain-containing protein -
  ST90728_RS07770 - 1505124..1505249 (-) 126 WP_011681534.1 hypothetical protein -
  ST90728_RS07775 (ST90728_07770) - 1505658..1507757 (-) 2100 WP_022096464.1 ATP-dependent Clp protease ATP-binding subunit -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 26830.05 Da        Isoelectric Point: 4.4606

>NTDB_id=510143 ST90728_RS07745 WP_002951673.1 1502158..1502889(-) (pptA) [Streptococcus thermophilus strain 90728]
MLKLEKVTGGYANIPVLKDVTFEVADGELVGLIGLNGAGKSTTINEIIGLLTPYGGQIAIDGLTIQQDPASYRQKIGYIP
ETPSLYEELTLREHLETVLMAYGLDVTEGMARADKYLKLFRLDEKLDWFPTQFSKGMKQKVMIICAFIVNPSLFIVDEPF
LGLDPLAISDLIELLAEEKANGKSILMSTHVLDSAEKMCDRFVILHHGQILAQGTIDELRQTFGDSSASLNDIYMQLTKG
ELS

Nucleotide


Download         Length: 732 bp        

>NTDB_id=510143 ST90728_RS07745 WP_002951673.1 1502158..1502889(-) (pptA) [Streptococcus thermophilus strain 90728]
ATGCTTAAATTAGAAAAGGTGACGGGTGGTTACGCTAATATTCCCGTCCTAAAAGATGTCACTTTTGAGGTGGCTGATGG
TGAATTGGTTGGTCTCATTGGTCTTAATGGTGCTGGGAAATCAACAACAATTAACGAGATTATTGGTCTCTTAACACCCT
ATGGAGGACAGATTGCCATTGATGGGTTAACTATTCAACAAGATCCAGCTAGCTATCGTCAGAAGATTGGCTATATTCCT
GAAACGCCAAGTCTTTATGAAGAATTGACGCTTCGTGAACATTTGGAAACGGTATTGATGGCCTATGGTCTTGATGTGAC
TGAGGGTATGGCACGTGCGGACAAGTACCTCAAACTCTTTCGCTTAGATGAAAAGTTGGACTGGTTCCCGACTCAGTTTT
CAAAAGGGATGAAGCAGAAGGTCATGATTATCTGCGCCTTTATTGTGAATCCAAGTCTTTTCATTGTTGATGAGCCCTTT
TTGGGATTGGATCCCTTGGCGATTTCTGATTTGATTGAGCTTCTGGCTGAGGAAAAAGCCAATGGCAAGTCTATTCTCAT
GTCGACTCACGTTTTGGATTCAGCTGAGAAGATGTGTGATCGCTTTGTGATTTTGCACCATGGACAGATCTTGGCACAGG
GGACGATTGATGAGCTTCGTCAGACCTTTGGTGACAGTAGTGCTAGTCTTAACGATATCTATATGCAGTTGACTAAGGGA
GAATTGTCATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

100

100

1
  pptA Streptococcus salivarius strain HSISS4

97.119

100

0.971