Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   I5V48_RS03750 Genome accession   NZ_CP065430
Coordinates   766030..767034 (+) Length   334 a.a.
NCBI ID   WP_197315130.1    Uniprot ID   A0A7T1LBD4
Organism   Streptococcus suis strain YZDH1     
Function   regulate comCDE transcription and transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 761030..772034
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I5V48_RS03725 (I5V48_03725) - 761039..761824 (+) 786 WP_029173686.1 PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC -
  I5V48_RS03730 (I5V48_03730) - 761817..762635 (+) 819 WP_014636433.1 PTS system mannose/fructose/sorbose family transporter subunit IID -
  I5V48_RS03735 (I5V48_03735) - 762648..763064 (+) 417 WP_024382209.1 PTS sugar transporter subunit IIA -
  I5V48_RS03740 (I5V48_03740) - 763172..764428 (-) 1257 WP_197315129.1 ISL3 family transposase -
  I5V48_RS03745 (I5V48_03745) - 764742..765821 (-) 1080 WP_043027331.1 M24 family metallopeptidase -
  I5V48_RS03750 (I5V48_03750) ccpA 766030..767034 (+) 1005 WP_197315130.1 catabolite control protein A Regulator
  I5V48_RS03755 (I5V48_03755) - 767447..769681 (-) 2235 WP_197315131.1 Spy0128 family protein -
  I5V48_RS03760 (I5V48_03760) - 769990..770988 (+) 999 WP_197315132.1 glycosyltransferase family 4 protein -

Sequence

Protein


Download         Length: 334 a.a.        Molecular weight: 36738.92 Da        Isoelectric Point: 5.5173

>NTDB_id=509514 I5V48_RS03750 WP_197315130.1 766030..767034(+) (ccpA) [Streptococcus suis strain YZDH1]
MLNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANAYF
ATLAKGIDDIADMYKYNIVLANSDENDEKEINVVNTLFSKQVDGIIFMGYHLTDKIRAEFSRSRTPIVLAGTVDLEHQLP
SVNIDYAAASVDAVNLLAKNNKKIAFVSGPLVDDINGKVRFAGYKQGLKDNGIEFNEGLVIESKYKYEEGYALAERILNA
GATAAYVAEDEIAAGLLNGVSDMGVKVPEDFEIITSDDSLVTKFTRPNLTSINQPLYDIGAIAMRMLTKIMHKEELENRE
VVLNHGIKVRKSTK

Nucleotide


Download         Length: 1005 bp        

>NTDB_id=509514 I5V48_RS03750 WP_197315130.1 766030..767034(+) (ccpA) [Streptococcus suis strain YZDH1]
ATGTTAAACACTGATGATACGGTTACGATTTACGATGTCGCCCGTGAAGCAGGTGTATCCATGGCGACAGTATCGCGCGT
GGTAAATGGGAATAAAAACGTAAAGGAAAATACTCGTAAAAAAGTATTAGAAGTCATCGACCGCTTGGATTATCGTCCAA
ATGCTGTTGCGCGTGGCTTGGCCAGCAAGAAGACTACCACTGTGGGGGTTGTGATTCCAAATATTGCTAACGCTTATTTT
GCAACCTTGGCCAAAGGTATCGATGATATTGCCGATATGTACAAATACAATATCGTCCTAGCAAACAGTGATGAAAATGA
TGAGAAAGAAATCAATGTGGTAAATACCCTATTCTCAAAACAGGTGGACGGAATCATTTTCATGGGCTATCATTTGACAG
ACAAGATTCGTGCGGAGTTTTCACGCTCACGTACCCCGATTGTTTTAGCTGGTACCGTGGACTTGGAGCACCAATTACCT
AGCGTCAATATTGACTATGCTGCTGCTAGTGTTGATGCAGTCAATCTATTAGCTAAGAACAACAAGAAAATTGCTTTTGT
ATCAGGGCCACTTGTAGATGACATCAACGGTAAAGTTCGTTTTGCAGGCTACAAACAAGGCTTGAAGGACAATGGAATCG
AGTTTAACGAAGGATTGGTTATTGAATCCAAGTATAAATACGAGGAGGGCTACGCTCTAGCAGAACGTATTTTGAATGCC
GGAGCAACTGCAGCTTATGTTGCAGAAGATGAGATTGCTGCTGGTCTATTGAATGGTGTCAGTGATATGGGCGTCAAGGT
TCCAGAAGACTTTGAAATCATTACAAGTGATGATTCCCTAGTGACCAAGTTTACCCGTCCAAACCTGACCTCTATCAATC
AGCCACTATACGATATTGGTGCAATTGCTATGCGCATGCTTACCAAAATCATGCACAAGGAAGAGTTGGAAAACCGTGAG
GTAGTTCTTAACCACGGAATCAAAGTACGGAAATCAACTAAGTAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, lacI family (LacI)

(9-54)

Periplasmic binding protein-like domain (Peripla_BP_3)

(176-333)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7T1LBD4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus pneumoniae D39

79.88

99.701

0.796
  ccpA Streptococcus gordonii str. Challis substr. CH1

79.279

99.701

0.79
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

58.912

99.102

0.584