Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | I5V48_RS00775 | Genome accession | NZ_CP065430 |
| Coordinates | 131733..132686 (+) | Length | 317 a.a. |
| NCBI ID | WP_043026794.1 | Uniprot ID | A0A0Z8IB17 |
| Organism | Streptococcus suis strain YZDH1 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 126733..137686
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I5V48_RS00735 (I5V48_00735) | - | 126879..127829 (-) | 951 | WP_043026809.1 | S66 family peptidase | - |
| I5V48_RS00740 (I5V48_00740) | comYA | 127915..128865 (+) | 951 | WP_043026808.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| I5V48_RS00745 (I5V48_00745) | comYB | 128777..129814 (+) | 1038 | WP_043026806.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| I5V48_RS00750 (I5V48_00750) | comYC | 129816..130097 (+) | 282 | WP_043026803.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| I5V48_RS00755 (I5V48_00755) | comGD | 130078..130485 (+) | 408 | WP_043026801.1 | competence type IV pilus minor pilin ComGD | - |
| I5V48_RS00760 (I5V48_00760) | comYE | 130457..130750 (+) | 294 | WP_043026799.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| I5V48_RS00765 (I5V48_00765) | comGF/cglF | 130737..131171 (+) | 435 | WP_043026797.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| I5V48_RS00770 (I5V48_00770) | comGG | 131149..131676 (+) | 528 | WP_043026795.1 | competence type IV pilus minor pilin ComGG | - |
| I5V48_RS00775 (I5V48_00775) | comYH | 131733..132686 (+) | 954 | WP_043026794.1 | class I SAM-dependent methyltransferase | Machinery gene |
| I5V48_RS00780 (I5V48_00780) | - | 132737..133924 (+) | 1188 | WP_043026792.1 | acetate kinase | - |
| I5V48_RS00785 (I5V48_00785) | - | 134239..134790 (+) | 552 | WP_043026790.1 | folate family ECF transporter S component | - |
| I5V48_RS00790 (I5V48_00790) | - | 134846..136102 (+) | 1257 | WP_043026788.1 | bifunctional folylpolyglutamate synthase/dihydrofolate synthase | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35723.73 Da Isoelectric Point: 4.3089
>NTDB_id=509503 I5V48_RS00775 WP_043026794.1 131733..132686(+) (comYH) [Streptococcus suis strain YZDH1]
MNFEKIEQAYDLLLENVQTIQNQLGTNIYDAMIEQNAAYVADQHETDLVVNNNQTLKQLDLTKEEWRRAYQFLLIKANQT
EPMQYNHQFTPDSIGFILSFLVDQLVATQKVTVLEIGSGTGNLAQTILNASQKELDYLGIEVDDLLIDLSASIADVMQAD
ISFAQGDAVRPQILKESQIILADLPIGYYPDDQIASRYQVASSIEHTYAHHLLMEQSLKYLEKDGFAILLAPNDLLTSPQ
SDLLKGWLQEQANIVAMIALPPNLFGKAAMAKSIFVLQKKAARSLTPFVYPLQSLQEPEAIQNFMLNFKNWKQENAI
MNFEKIEQAYDLLLENVQTIQNQLGTNIYDAMIEQNAAYVADQHETDLVVNNNQTLKQLDLTKEEWRRAYQFLLIKANQT
EPMQYNHQFTPDSIGFILSFLVDQLVATQKVTVLEIGSGTGNLAQTILNASQKELDYLGIEVDDLLIDLSASIADVMQAD
ISFAQGDAVRPQILKESQIILADLPIGYYPDDQIASRYQVASSIEHTYAHHLLMEQSLKYLEKDGFAILLAPNDLLTSPQ
SDLLKGWLQEQANIVAMIALPPNLFGKAAMAKSIFVLQKKAARSLTPFVYPLQSLQEPEAIQNFMLNFKNWKQENAI
Nucleotide
Download Length: 954 bp
>NTDB_id=509503 I5V48_RS00775 WP_043026794.1 131733..132686(+) (comYH) [Streptococcus suis strain YZDH1]
ATGAATTTTGAAAAGATCGAACAGGCTTACGACCTGCTATTAGAAAACGTACAGACTATCCAAAACCAGCTAGGTACCAA
TATCTATGATGCCATGATTGAGCAAAATGCTGCTTACGTAGCTGATCAGCATGAGACGGACCTTGTTGTCAATAACAATC
AGACCTTGAAACAACTAGATTTAACCAAGGAAGAATGGCGTCGTGCCTACCAATTCTTGCTCATCAAGGCCAATCAGACT
GAACCCATGCAGTACAATCACCAGTTCACACCAGATTCTATCGGATTTATCCTATCTTTTCTAGTAGACCAATTGGTGGC
GACTCAAAAGGTGACGGTTCTGGAAATTGGTTCGGGGACAGGCAATCTAGCTCAGACCATTCTCAACGCCAGCCAGAAAG
AATTGGATTACTTGGGGATCGAAGTGGATGATCTCTTGATTGATTTGTCGGCAAGTATTGCGGATGTCATGCAGGCAGAT
ATTTCTTTTGCTCAGGGCGATGCGGTACGTCCGCAGATTTTGAAGGAAAGCCAAATCATTCTTGCGGATTTGCCGATTGG
TTACTATCCAGATGATCAGATTGCTAGCCGTTATCAGGTCGCCAGTTCAATTGAACATACCTACGCCCATCATTTACTCA
TGGAACAATCCCTCAAATATCTGGAAAAAGATGGCTTTGCGATTTTGTTGGCTCCAAATGATTTATTGACTAGTCCGCAA
AGCGATTTGCTGAAAGGTTGGTTACAGGAGCAAGCCAATATTGTTGCCATGATTGCCCTGCCACCAAATCTCTTTGGGAA
GGCTGCTATGGCCAAGTCTATTTTTGTCTTGCAAAAGAAAGCTGCAAGATCGTTGACGCCGTTTGTTTATCCCTTGCAAA
GTCTTCAAGAACCAGAAGCTATTCAGAACTTCATGCTCAATTTCAAAAATTGGAAGCAAGAGAATGCAATTTAA
ATGAATTTTGAAAAGATCGAACAGGCTTACGACCTGCTATTAGAAAACGTACAGACTATCCAAAACCAGCTAGGTACCAA
TATCTATGATGCCATGATTGAGCAAAATGCTGCTTACGTAGCTGATCAGCATGAGACGGACCTTGTTGTCAATAACAATC
AGACCTTGAAACAACTAGATTTAACCAAGGAAGAATGGCGTCGTGCCTACCAATTCTTGCTCATCAAGGCCAATCAGACT
GAACCCATGCAGTACAATCACCAGTTCACACCAGATTCTATCGGATTTATCCTATCTTTTCTAGTAGACCAATTGGTGGC
GACTCAAAAGGTGACGGTTCTGGAAATTGGTTCGGGGACAGGCAATCTAGCTCAGACCATTCTCAACGCCAGCCAGAAAG
AATTGGATTACTTGGGGATCGAAGTGGATGATCTCTTGATTGATTTGTCGGCAAGTATTGCGGATGTCATGCAGGCAGAT
ATTTCTTTTGCTCAGGGCGATGCGGTACGTCCGCAGATTTTGAAGGAAAGCCAAATCATTCTTGCGGATTTGCCGATTGG
TTACTATCCAGATGATCAGATTGCTAGCCGTTATCAGGTCGCCAGTTCAATTGAACATACCTACGCCCATCATTTACTCA
TGGAACAATCCCTCAAATATCTGGAAAAAGATGGCTTTGCGATTTTGTTGGCTCCAAATGATTTATTGACTAGTCCGCAA
AGCGATTTGCTGAAAGGTTGGTTACAGGAGCAAGCCAATATTGTTGCCATGATTGCCCTGCCACCAAATCTCTTTGGGAA
GGCTGCTATGGCCAAGTCTATTTTTGTCTTGCAAAAGAAAGCTGCAAGATCGTTGACGCCGTTTGTTTATCCCTTGCAAA
GTCTTCAAGAACCAGAAGCTATTCAGAACTTCATGCTCAATTTCAAAAATTGGAAGCAAGAGAATGCAATTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA159 |
60.443 |
99.685 |
0.603 |
| comYH | Streptococcus mutans UA140 |
60.127 |
99.685 |
0.599 |