Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   KU510_RS11405 Genome accession   NZ_CP077861
Coordinates   2314531..2315517 (+) Length   328 a.a.
NCBI ID   WP_000959298.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 372     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2309531..2320517
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KU510_RS11385 (KU510_11340) - 2309975..2311621 (+) 1647 WP_000277723.1 IS1182-like element ISSau3 family transposase -
  KU510_RS11390 (KU510_11345) trpS 2311647..2312630 (-) 984 WP_225805728.1 tryptophan--tRNA ligase -
  KU510_RS11395 (KU510_11350) spxA 2312925..2313320 (+) 396 WP_000258003.1 transcriptional regulator SpxA -
  KU510_RS11400 (KU510_11355) mecA 2313691..2314410 (+) 720 WP_001217728.1 adaptor protein MecA -
  KU510_RS11405 (KU510_11360) coiA 2314531..2315517 (+) 987 WP_000959298.1 competence protein CoiA Machinery gene
  KU510_RS11410 (KU510_11365) pepF 2315565..2317373 (+) 1809 WP_000082725.1 oligoendopeptidase F Regulator
  KU510_RS11415 (KU510_11370) yjbH 2317833..2318639 (-) 807 WP_000896697.1 protease adaptor protein YjbH -
  KU510_RS11420 (KU510_11375) - 2318662..2319027 (-) 366 WP_000214067.1 truncated hemoglobin YjbI -
  KU510_RS11425 (KU510_11380) - 2319131..2319724 (-) 594 WP_000224622.1 CYTH domain-containing protein -
  KU510_RS11430 (KU510_11385) - 2319910..2320257 (+) 348 WP_001242107.1 hypothetical protein -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38745.27 Da        Isoelectric Point: 9.6529

>NTDB_id=508904 KU510_RS11405 WP_000959298.1 2314531..2315517(+) (coiA) [Staphylococcus aureus strain 372]
MLVALNGEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNESIKHYKSKLILAQMIQQQGCKV
EIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFQSMFINPITRKL
HTFNLEKKQIMMFQQIQYIGGHKYVAEKRNAKISELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLH
LTDQEVVHNYGYIFPEQIYIENHPIEWQLQVDLWLKNGKSKLESDNLNYFKLKKFIVALESKTAIIEKLINNYLNISSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=508904 KU510_RS11405 WP_000959298.1 2314531..2315517(+) (coiA) [Staphylococcus aureus strain 372]
ATGTTAGTAGCTTTAAATGGAGAAAAGGAACGCGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCGGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAATCGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCAAAGTATGTTTATTAATCCAATCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATATAGGCGGGCACAAATATGTCGCTGA
AAAAAGGAATGCCAAAATTAGTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAGTTCG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAGTTGCAT
TTAACTGATCAAGAAGTAGTGCACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCAATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAAAAAGCAAATTAGAAAGTGACAATCTTAATTATTTTAAACTGAAAA
AGTTTATTGTTGCTCTAGAAAGTAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTAGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterProScan.

Competence protein CoiA-like family (CoiA_nuc)

(10-306)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus MW2

96.646

100

0.966
  coiA Staphylococcus aureus N315

96.646

100

0.966