Detailed information NTG0508200

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: I3X05_RS13375
• Genome accession: NZ_CP065217
• Coordinates: 2843009..2846398 (+)
• Length: 1129 a.a.
• NCBI ID: WP_045571158.1
• Uniprot ID: A0A0F2HY97
• Organism: Vibrio navarrensis strain 20-VB00237
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2838009..2851398

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I3X05_RS13355 (I3X05_13700)	erpA	2838417..2838758 (-)	342	WP_045571155.1	iron-sulfur cluster insertion protein ErpA	-
I3X05_RS13360 (I3X05_13705)	hemL	2839040..2840335 (+)	1296	WP_045571156.1	glutamate-1-semialdehyde 2,1-aminomutase	-
I3X05_RS13365 (I3X05_13710)	-	2840577..2841662 (+)	1086	WP_045571272.1	AI-2E family transporter	-
I3X05_RS13370 (I3X05_13715)	rsmC	2841734..2842756 (+)	1023	WP_045571157.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
I3X05_RS13375 (I3X05_13720)	chiS	2843009..2846398 (+)	3390	WP_045571158.1	response regulator	Regulator
I3X05_RS13380 (I3X05_13725)	-	2847170..2848843 (+)	1674	WP_045571159.1	ABC transporter substrate-binding protein	-
I3X05_RS13385 (I3X05_13730)	-	2849010..2849996 (+)	987	WP_045571160.1	ABC transporter permease	-
I3X05_RS13390 (I3X05_13735)	-	2849999..2851024 (+)	1026	WP_045571161.1	ABC transporter permease	-

Sequence

Protein

• Length: 1129 a.a.
• Molecular weight: 127151.42 Da
• Isoelectric Point: 6.2991

>NTDB_id=508200 I3X05_RS13375 WP_045571158.1 2843009..2846398(+) (chiS) [Vibrio navarrensis strain 20-VB00237]
MFKFYRKQKFKRLQSTLMTAFLVLSLTPLTIIAIFFLQSHSKDLQEQSTSHLLSVRDTKQQQVMDYFQAQETEVMGFVRS
ELAYASGGRFYGLVNAFKSLGLDIEQARENAQQRYIPGSGDQIKTSILPESSSYVGSERYRLLHKRYHWAYLELLKRSDF
DDILLIDLDGNVTYSIYKYDNFGTNLKTGPYKDTLLGMSFRQLAKDVTEKRKDNEDYTPVLISDFAEEDGKQVAWLGAPI
IQQGYLHSYAMFRLPNNGLTKLVADVSKDAVIHTLLVGSDHSPRTMSTKQDDISQSAEVINKALAGLTSVGTYINGLGEA
TIAAFTPIIMKGQTWALVVQLPESEAFARIQQLEKLFVIAMLIAIILVFICSHYLSNFITSPLLKLTWAAERVSAGDLDE
NMINTDRRDEIGRLAVSFERMQRSIRDKIQLIKTQNRELEKSLQLIQKQNDELQLADKLKDEFLATTSHELRTPLHGMIG
IAETLVSGANGPIPGSQKYQLDIIIKSGQRLANLVDDLLDYHKMRYGSLDIHKSAVSLASATRLVLELSSHLLGNKTLRI
INQVPNDLAPVSADPQRLEQVLYNLIGNAIKYTSEGKIVISANVVDGKARIQVVDTGQGIPAEQLEHIFEPLIQAGQDAG
RYRQGAGLGLSISRQLIELMGGSLYVSSQPMVGTTFSFTLPLASDDEINTTAKMSQYHHFQAPDSNELFSLDQSSLPENP
QGALLVVADDEPVNLRVLESFLRIEGYRVKTASDGPETLALIKQEKPALLLLDIMMPGMSGYQVCHQLRQEFDLAELPVI
MLTALNQSEDRVRGFEAGANDYLSKPFNKHELAARIKAHLMASKAEERRLENSRLEAELKQRAMVEASLLETQGRLLEQL
ESAPEAIICIREDKRIRFANEAACKLFKRNLEQLRRSNAEELIAPKYLTVKQPHYCGHIDIYVEDVRQHIETDILKLPEG
SGLDAMYIFNVGGGATASRIHNLETAVEVLSSYAFDGDKEKLQSLKELGGEFTRLADKALGSSQNKQEIMREVLVDVMTH
ALDYWESVSGENKFAFAEKSGLWRVYLDRSTLQTRTLDKYMRIETLPRTPRWRTVLSSIEFILAHCKEQSPERSYIEMQR
DKLQRLLTS

Nucleotide

• Length: 3390 bp

>NTDB_id=508200 I3X05_RS13375 WP_045571158.1 2843009..2846398(+) (chiS) [Vibrio navarrensis strain 20-VB00237]
ATGTTTAAGTTTTACCGGAAACAGAAATTCAAACGTCTGCAAAGCACCCTGATGACGGCCTTTTTGGTGTTGAGCCTGAC
ACCATTGACCATCATTGCGATTTTCTTTTTGCAATCTCATAGCAAGGATCTGCAAGAGCAAAGCACTTCCCACCTACTTT
CGGTGCGCGATACCAAGCAACAACAGGTGATGGATTATTTTCAGGCACAAGAAACCGAAGTGATGGGGTTTGTCCGTTCA
GAGTTGGCTTATGCCAGTGGCGGGCGTTTTTATGGCCTCGTCAACGCCTTTAAAAGCCTTGGTTTGGATATCGAGCAAGC
ACGCGAAAACGCCCAGCAACGCTATATTCCTGGCTCGGGCGATCAGATCAAAACGTCAATCTTGCCTGAATCCAGCAGTT
ATGTCGGTAGTGAACGTTACCGACTGCTGCATAAGCGCTATCACTGGGCCTACCTAGAGCTACTCAAACGCTCCGATTTT
GACGACATCCTGCTCATCGACTTGGATGGTAACGTGACCTACTCCATCTACAAATACGATAATTTTGGTACCAACCTGAA
AACGGGGCCCTACAAAGACACTTTGCTTGGAATGAGCTTTCGCCAGCTTGCCAAAGACGTCACTGAAAAGCGCAAGGACA
ACGAAGATTACACCCCAGTACTGATTTCCGACTTCGCCGAGGAGGATGGTAAACAGGTCGCTTGGTTAGGTGCGCCCATC
ATTCAACAAGGCTACTTGCACAGCTATGCGATGTTCCGTTTGCCCAACAATGGCTTAACCAAACTGGTTGCCGATGTAAG
CAAAGATGCGGTTATCCATACTTTACTCGTAGGTAGTGACCACTCACCTCGCACCATGAGTACCAAACAGGACGACATTA
GCCAAAGTGCGGAAGTGATCAACAAAGCATTGGCAGGATTAACCTCGGTTGGAACCTACATTAATGGCTTAGGCGAAGCG
ACCATTGCCGCATTTACCCCCATTATCATGAAAGGACAAACTTGGGCGTTGGTAGTTCAATTGCCTGAAAGCGAAGCCTT
TGCTCGCATCCAACAGTTGGAGAAACTGTTTGTCATCGCCATGCTGATTGCCATCATTCTGGTGTTTATCTGCTCACATT
ATCTATCCAATTTCATTACCTCTCCGCTGCTTAAACTGACTTGGGCAGCAGAACGAGTCTCTGCTGGCGATCTTGACGAG
AATATGATCAATACAGATCGCCGGGATGAAATTGGCCGTTTGGCGGTCAGCTTTGAACGTATGCAGCGCTCCATTCGCGA
CAAAATTCAGTTAATCAAAACGCAGAACCGAGAGTTGGAAAAAAGCCTGCAATTGATCCAAAAACAAAACGATGAGCTGC
AATTAGCCGATAAACTCAAAGATGAGTTCCTCGCGACCACCTCACACGAATTGCGCACTCCATTGCATGGTATGATTGGC
ATTGCCGAAACCTTAGTCTCCGGTGCCAATGGTCCGATTCCTGGCAGCCAAAAATATCAGCTAGACATCATCATCAAAAG
CGGCCAAAGGCTTGCAAACCTAGTCGACGACCTACTTGATTATCACAAAATGCGCTACGGCAGCTTGGACATTCATAAAT
CGGCTGTCAGTTTGGCCAGTGCCACACGCTTAGTGCTTGAGCTTTCCAGTCATCTGCTCGGCAATAAAACACTACGAATC
ATTAATCAAGTTCCAAACGATCTCGCCCCCGTTTCCGCCGATCCACAACGCTTGGAGCAAGTGTTGTACAACTTGATTGG
CAACGCTATCAAATACACCAGTGAAGGCAAAATCGTCATCTCCGCCAACGTGGTAGACGGCAAAGCAAGAATCCAAGTCG
TAGACACTGGACAGGGCATTCCAGCAGAACAGTTGGAGCACATTTTTGAGCCGTTAATCCAAGCGGGGCAAGATGCAGGT
CGTTACCGGCAAGGCGCTGGTCTTGGCCTCTCGATTAGCCGTCAGTTGATTGAGCTGATGGGCGGCTCACTGTATGTCAG
CAGCCAGCCAATGGTTGGCACTACCTTTAGTTTTACCCTGCCTTTGGCAAGTGATGACGAGATCAATACCACAGCGAAGA
TGTCGCAATACCATCACTTCCAAGCACCTGACAGCAACGAATTGTTCTCTCTCGACCAATCGTCGCTTCCAGAAAATCCG
CAGGGCGCCTTATTAGTGGTGGCTGACGATGAACCCGTTAATCTACGTGTACTGGAAAGTTTCCTGCGCATTGAAGGTTA
TCGCGTCAAAACCGCTTCCGATGGCCCAGAAACTCTCGCACTGATCAAGCAAGAGAAGCCAGCGTTATTGCTACTCGATA
TCATGATGCCGGGTATGAGTGGTTATCAGGTTTGTCATCAGTTACGTCAAGAATTCGATCTGGCTGAACTGCCCGTCATC
ATGCTGACCGCACTCAATCAAAGTGAAGATCGCGTGCGCGGCTTTGAAGCGGGTGCCAACGACTACTTATCCAAACCGTT
TAATAAGCATGAGCTTGCCGCGCGAATCAAGGCACATCTAATGGCGAGTAAAGCCGAAGAGCGACGCTTGGAAAATAGCC
GCTTGGAAGCCGAATTAAAGCAGCGTGCCATGGTCGAAGCAAGTTTACTGGAGACACAAGGACGGCTACTGGAGCAACTG
GAATCCGCCCCTGAAGCCATCATCTGTATCCGGGAAGACAAACGCATCCGTTTTGCCAACGAAGCCGCTTGTAAACTGTT
TAAACGCAATTTGGAACAACTCAGGCGTTCAAACGCAGAGGAATTGATTGCGCCCAAGTACCTAACCGTCAAACAACCAC
ACTATTGCGGCCACATTGATATTTACGTCGAAGATGTAAGACAGCACATTGAAACCGACATTCTCAAATTACCTGAAGGA
TCAGGTTTAGATGCCATGTATATCTTCAACGTCGGCGGCGGCGCAACCGCGTCGCGCATTCACAACTTAGAAACCGCCGT
TGAGGTGCTCTCAAGCTATGCTTTTGATGGCGATAAAGAGAAACTTCAAAGCCTGAAAGAACTGGGCGGAGAGTTCACTC
GATTGGCTGACAAAGCTTTAGGGAGCAGCCAAAACAAACAAGAGATAATGCGTGAGGTTTTGGTCGATGTGATGACTCAT
GCGTTAGACTACTGGGAGTCAGTCTCGGGTGAGAATAAGTTTGCTTTTGCTGAGAAAAGCGGCTTGTGGCGCGTCTATCT
CGACCGAAGTACGCTGCAAACCCGTACTCTCGACAAATACATGCGCATTGAAACATTACCAAGAACGCCTCGTTGGCGTA
CGGTACTCAGTTCTATTGAGTTTATTCTCGCGCATTGTAAAGAGCAGAGCCCAGAGCGTAGCTACATTGAAATGCAGCGC
GATAAGCTGCAACGTCTACTCACCAGCTAG

Domains

Predicted by InterproScan.

• PAS fold (PAS) (877-926)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• Response regulator receiver domain (Response_reg) (726-837)

• HAMP domain (HAMP) (375-427)

3D structure

• AlphaFold DB: A0A0F2HY97

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	76.085	100	0.761