Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   I2438_RS07360 Genome accession   NZ_CP065190
Coordinates   1512507..1513508 (-) Length   333 a.a.
NCBI ID   WP_012677612.1    Uniprot ID   A0A6M1KZY1
Organism   Streptococcus equi subsp. zooepidemicus strain SEZ36     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1507507..1518508
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I2438_RS07345 (HCFMJIKG_01457) - 1508331..1509665 (-) 1335 WP_021321000.1 glycosyltransferase family 4 protein -
  I2438_RS07350 (HCFMJIKG_01458) - 1509667..1510665 (-) 999 WP_012516005.1 glycosyltransferase family 4 protein -
  I2438_RS07355 (HCFMJIKG_01459) - 1510962..1512437 (-) 1476 WP_021321001.1 alpha-amylase -
  I2438_RS07360 (HCFMJIKG_01460) ccpA 1512507..1513508 (-) 1002 WP_012677612.1 catabolite control protein A Regulator
  I2438_RS07365 (HCFMJIKG_01461) - 1513682..1514767 (+) 1086 WP_012679860.1 M24 family metallopeptidase -
  I2438_RS07370 (HCFMJIKG_01462) - 1515135..1515803 (+) 669 WP_021321002.1 NAD(P)H-dependent oxidoreductase -
  I2438_RS07375 (HCFMJIKG_01463) - 1515917..1516843 (+) 927 WP_231146174.1 glycosyltransferase family 2 protein -
  I2438_RS07380 (HCFMJIKG_01464) smpB 1517129..1517596 (-) 468 WP_012516013.1 SsrA-binding protein SmpB -

Sequence

Protein


Download         Length: 333 a.a.        Molecular weight: 36617.72 Da        Isoelectric Point: 5.7618

>NTDB_id=507775 I2438_RS07360 WP_012677612.1 1512507..1513508(-) (ccpA) [Streptococcus equi subsp. zooepidemicus strain SEZ36]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFS
ILAKGIDDIAAMYKYNIVLASSDEDDDKEVNVVNTLFAKQVDGIIFMGHHLTDKIRAEFSRSRTPIVLAGTVDLDHQLPS
VNIDYKAAVADVVDILAKDHQSIAFVSGPLIDDINGKVRLAGYKDGLKKNKLDFKEGLVFEANYSYKEGFDLAQRVINSG
ATAAYVAEDELAAGLLNGLFEAGKRVPEDFEIITSNDSPVVQYTRPNLSSISQPVYDLGAVSMRMLTKIMNKEELEEKEI
LLNHGIKKRGTTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=507775 I2438_RS07360 WP_012677612.1 1512507..1513508(-) (ccpA) [Streptococcus equi subsp. zooepidemicus strain SEZ36]
ATGAATACAGATGATACAATCACGATTTATGATGTTGCTCGCGAAGCGGGAGTTTCAATGGCGACAGTTAGTCGAGTTGT
AAATGGTAACAAAAATGTAAAGGAAAATACCCGCAAAAAGGTCTTAGAGGTTATTGATCGTCTCGATTATCGTCCAAATG
CTGTTGCTCGTGGTCTTGCAAGTAAAAAGACAACAACAGTTGGTGTTGTGATTCCTAATATTGCAAATAGCTATTTTTCT
ATCCTGGCAAAGGGAATTGATGATATTGCTGCTATGTACAAGTACAATATTGTTCTTGCTTCAAGCGATGAGGACGACGA
TAAAGAGGTCAATGTTGTGAATACCCTCTTTGCAAAGCAGGTTGATGGCATTATTTTCATGGGACATCACTTGACTGACA
AGATTCGTGCAGAGTTTTCTCGTTCGCGTACGCCAATTGTTCTGGCAGGAACGGTTGATCTGGATCATCAGCTGCCAAGT
GTTAACATTGATTATAAGGCGGCTGTTGCTGATGTTGTGGACATTTTAGCTAAAGACCACCAAAGCATTGCCTTTGTTTC
AGGGCCGCTCATTGATGATATCAATGGAAAGGTGCGTTTGGCTGGCTACAAGGACGGACTCAAGAAGAACAAGCTTGATT
TTAAAGAGGGTCTGGTGTTTGAAGCCAACTATTCCTATAAGGAAGGCTTTGATTTGGCTCAGCGTGTGATCAATTCCGGA
GCGACAGCTGCCTATGTTGCAGAGGACGAGCTGGCAGCAGGCCTTTTGAATGGTCTTTTTGAAGCTGGCAAGCGTGTTCC
AGAGGACTTTGAGATTATTACAAGCAATGATTCTCCAGTCGTTCAGTACACACGTCCAAATTTGAGCTCTATCAGTCAGC
CAGTCTATGACTTGGGTGCTGTTAGCATGCGTATGCTCACTAAGATCATGAATAAGGAAGAATTAGAAGAAAAAGAAATT
TTATTGAACCATGGCATTAAAAAGCGTGGGACAACAAAATAG

Domains

Predicted by InterproScan.

Periplasmic binding protein-like domain (Peripla_BP_3)

(177-332)

Bacterial regulatory proteins, lacI family (LacI)

(8-53)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6M1KZY1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

78.078

100

0.781
  ccpA Streptococcus pneumoniae D39

76.877

100

0.769
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

54.985

99.399

0.547