Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG   Type   Machinery gene
Locus tag   KU217_RS01960 Genome accession   NZ_CP077835
Coordinates   413391..415436 (-) Length   681 a.a.
NCBI ID   WP_000204953.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain DETAB-P65     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 408391..420436
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KU217_RS01925 (KU217_01925) - 408876..409556 (+) 681 WP_000842362.1 outer membrane lipid asymmetry maintenance protein MlaD -
  KU217_RS01930 (KU217_01930) - 409583..410224 (+) 642 WP_001093907.1 ABC transporter substrate-binding protein -
  KU217_RS01935 (KU217_01935) - 410236..410523 (+) 288 WP_000250997.1 STAS domain-containing protein -
  KU217_RS01940 (KU217_01940) - 410592..411605 (-) 1014 WP_000888321.1 CorA family divalent cation transporter -
  KU217_RS01945 (KU217_01945) - 411763..412344 (+) 582 WP_001084310.1 TIGR00730 family Rossman fold protein -
  KU217_RS01950 (KU217_01950) - 412359..412760 (+) 402 WP_071210856.1 NUDIX domain-containing protein -
  KU217_RS01955 (KU217_01955) comF 412763..413398 (-) 636 WP_000472270.1 phosphoribosyltransferase family protein Machinery gene
  KU217_RS01960 (KU217_01960) recG 413391..415436 (-) 2046 WP_000204953.1 ATP-dependent DNA helicase RecG Machinery gene
  KU217_RS01965 (KU217_01965) - 415457..416272 (+) 816 WP_000547774.1 NAD(P)H-binding protein -
  KU217_RS01970 (KU217_01970) adeT2 416352..417338 (+) 987 WP_071210857.1 putative multidrug efflux protein AdeT2 -
  KU217_RS01975 (KU217_01975) plsB 417382..419955 (-) 2574 WP_000045408.1 glycerol-3-phosphate 1-O-acyltransferase PlsB -

Sequence

Protein


Download         Length: 681 a.a.        Molecular weight: 76435.01 Da        Isoelectric Point: 7.7343

>NTDB_id=507658 KU217_RS01960 WP_000204953.1 413391..415436(-) (recG) [Acinetobacter baumannii strain DETAB-P65]
MTSVHQLQGVGSASAALLEKLNIFTTDDLLFHLPRDYEDRSTIIPMNQLVVGRSYLLEGEVKSVDFPPGKRKSMAALIQD
EFGKVTLRFYHIYKNLTDKIKPGNRLRIFGEVRVGARGLELYHPEIQLINEHTPLPKTQLTAIYPSTDGLTQAKLREYVK
QALKHHSDALPELLPKQYTNGYALKEALHYIHEPPVDANMIQLAQGSHPAQQRLIFEELVAHQISLLTRRAYIRQIASPA
FPSSKVLAKKLLEALPFQMTNAQKRVSKEILNDLKQHQPMLRLVQGDVGAGKTLVAAVAACHALEADWQVALMAPTEILA
EQHYLNFKRWFEPLGITVAWLSGKQKGKARAHAEQQIKEGHAELIVGTHALFQDNVEFAKLGLVIIDEQHRFGVDQRLAL
RNKGAEQLTPHQLVMTATPIPRTLAMSAYGDLDTSIIDELPPGRTPIQTVTIPLDRREEVLHRIASNCREGKQAYWVCTL
VEQSETLDAQAAEATYQEMKERFPELNIGLVHGKMKADEKQAVMQAFKNNELQLLIATTVIEVGVDVPNASIMVIENAER
LGLSQLHQLRGRVGRGAKASFCVLLYKPPLSQNGQERLSILRESNDGFVIAEKDLELRGPGELLGTKQTGDMGFRVARLE
RDDHLLSQAHYVAQQVLKDYPEQADALLKRWLPEAPRYAYV

Nucleotide


Download         Length: 2046 bp        

>NTDB_id=507658 KU217_RS01960 WP_000204953.1 413391..415436(-) (recG) [Acinetobacter baumannii strain DETAB-P65]
ATGACTTCAGTCCATCAGTTACAAGGCGTTGGATCGGCTTCAGCAGCCCTACTCGAAAAACTAAATATTTTTACCACAGA
TGATTTGCTGTTTCATCTGCCCCGTGATTATGAAGATCGCAGTACCATTATTCCTATGAATCAATTGGTGGTTGGTCGTA
GTTATTTACTCGAGGGTGAAGTCAAATCTGTTGATTTCCCTCCAGGTAAACGTAAATCTATGGCCGCATTAATACAAGAT
GAATTTGGTAAGGTGACTTTACGCTTTTATCATATTTATAAAAATTTAACTGACAAAATAAAACCTGGTAACCGTTTACG
TATTTTTGGTGAAGTTCGTGTAGGTGCACGAGGACTCGAGCTTTATCATCCAGAAATTCAACTTATTAATGAACATACAC
CACTACCAAAAACGCAGCTCACTGCAATTTATCCAAGTACCGATGGCCTAACACAAGCTAAATTACGCGAATATGTTAAA
CAAGCGTTGAAGCATCATAGTGATGCCTTACCCGAGTTACTCCCTAAACAATATACAAATGGGTATGCACTCAAAGAAGC
TTTACATTACATTCACGAGCCGCCAGTTGATGCCAATATGATCCAACTGGCTCAAGGCTCTCATCCTGCGCAGCAACGTC
TTATTTTTGAAGAGCTGGTCGCACATCAAATTAGTCTTCTCACTCGACGTGCTTATATTCGCCAAATTGCTTCACCTGCT
TTTCCGAGTAGTAAAGTGCTTGCAAAAAAGCTACTAGAAGCTTTACCTTTTCAAATGACCAACGCACAAAAACGTGTATC
AAAAGAAATTTTAAACGACTTAAAACAACATCAACCTATGCTACGTTTGGTACAAGGTGATGTAGGGGCTGGAAAAACTT
TAGTTGCAGCGGTTGCAGCATGTCACGCATTGGAAGCAGATTGGCAAGTTGCGTTAATGGCACCTACCGAAATTTTAGCA
GAGCAGCATTATTTAAATTTTAAACGCTGGTTTGAACCTTTAGGTATTACGGTAGCTTGGTTGTCGGGTAAACAAAAAGG
GAAAGCGCGGGCACACGCTGAGCAACAAATTAAAGAAGGCCATGCTGAACTGATCGTGGGCACCCATGCCTTATTTCAAG
ATAACGTTGAGTTTGCAAAACTAGGACTCGTGATTATTGATGAACAGCACCGATTCGGGGTCGATCAGCGATTAGCCTTA
CGCAATAAAGGCGCCGAACAGCTCACCCCACATCAACTGGTCATGACTGCAACGCCAATTCCTAGAACACTGGCAATGAG
TGCTTATGGCGATTTAGATACATCGATTATTGATGAATTACCGCCAGGCCGAACTCCAATTCAGACCGTCACGATTCCGC
TAGATCGTCGTGAAGAAGTACTGCATCGAATTGCTTCAAACTGCCGAGAAGGCAAACAGGCCTACTGGGTATGTACTCTG
GTTGAACAGTCCGAAACTTTAGATGCTCAAGCCGCCGAAGCCACCTATCAAGAAATGAAAGAGCGCTTTCCTGAACTTAA
TATTGGTTTGGTTCATGGTAAAATGAAAGCCGATGAAAAACAGGCCGTCATGCAAGCATTTAAAAACAATGAACTACAAC
TGCTAATTGCCACAACTGTTATTGAGGTTGGGGTAGATGTACCTAACGCTTCGATTATGGTCATTGAGAATGCTGAACGA
TTAGGGCTTTCACAGCTACACCAATTACGAGGGCGTGTAGGACGAGGTGCAAAAGCCAGTTTTTGTGTTCTTCTCTATAA
ACCACCACTTTCACAAAATGGGCAAGAAAGACTTTCAATTTTAAGAGAAAGTAATGATGGCTTTGTTATTGCTGAAAAAG
ATCTTGAGCTAAGAGGCCCGGGTGAGTTATTAGGAACAAAACAAACAGGTGATATGGGTTTCCGTGTCGCACGTTTAGAG
CGAGATGATCATTTATTGAGTCAAGCACACTACGTTGCACAACAAGTTCTAAAAGATTACCCTGAGCAAGCTGATGCCTT
ATTGAAGCGCTGGCTTCCCGAAGCTCCTCGATATGCATATGTTTAA

Domains

Predicted by InterProScan.

Helicase conserved C-terminal domain (Helicase_C)

(466-576)

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(605-663)

DEAD/DEAH box helicase (DEAD)

(262-422)

RecG wedge domain (RecG_wedge)

(7-163)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Neisseria meningitidis strain C311

49.925

98.238

0.49
  recG/mmsA Streptococcus pneumoniae R6

41.504

97.651

0.405
  recG/mmsA Streptococcus pneumoniae R36A

41.504

97.651

0.405
  recG Bacillus subtilis subsp. subtilis str. 168

38.574

100

0.389