Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   SMULJ23_RS02835 Genome accession   NC_017768
Coordinates   566269..567270 (+) Length   333 a.a.
NCBI ID   WP_014677851.1    Uniprot ID   -
Organism   Streptococcus mutans LJ23     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 561269..572270
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SMULJ23_RS02810 (SMULJ23_0530) - 561276..561794 (+) 519 WP_002304567.1 hypothetical protein -
  SMULJ23_RS02815 (SMULJ23_0531) celB 561810..563168 (+) 1359 WP_002306644.1 PTS cellobiose transporter subunit IIC -
  SMULJ23_RS02820 (SMULJ23_0532) - 563434..564204 (+) 771 WP_014677849.1 carbonic anhydrase family protein -
  SMULJ23_RS02825 (SMULJ23_0533) - 564331..564912 (+) 582 WP_002262795.1 CDP-archaeol synthase -
  SMULJ23_RS02830 (SMULJ23_0534) - 565027..566106 (-) 1080 WP_014677850.1 Xaa-Pro peptidase family protein -
  SMULJ23_RS02835 (SMULJ23_0535) ccpA 566269..567270 (+) 1002 WP_014677851.1 catabolite control protein A Regulator
  SMULJ23_RS02840 (SMULJ23_0536) - 567417..568877 (+) 1461 WP_014677852.1 alpha-amylase -
  SMULJ23_RS02845 (SMULJ23_0537) - 568987..569985 (+) 999 WP_002270493.1 glycosyltransferase -
  SMULJ23_RS02850 (SMULJ23_0538) - 569987..571321 (+) 1335 WP_014677854.1 glycosyltransferase family 4 protein -
  SMULJ23_RS10635 - 571400..571599 (+) 200 Protein_531 hypothetical protein -
  SMULJ23_RS02855 (SMULJ23_0539) - 571593..572233 (+) 641 Protein_532 AAA family ATPase -

Sequence


Protein


Download         Length: 333 a.a.        Molecular weight: 36643.92 Da        Isoelectric Point: 6.8583

>NTDB_id=50750 SMULJ23_RS02835 WP_014677851.1 566269..567270(+) (ccpA) [Streptococcus mutans LJ23]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANAYFS
ILAKGIDDIATMYKYNIVLASSDEDDDKEVNVINTLFAKQVDGIIFMGHHLTEKIRAEFSRARTPVVLSGTVDLEHQLPS
VNIDHSKAAQDAVALLAKHHDKIAFVSGPLIDDINGKVRLAGYKEGLKKKGLPFKEGLVFEAQYKYQEGYQLAQRVINSG
ATAAYVAEDELAAGLLNGLFATGKKVPEDFEIITSNDSTIALYTRPNMTSISQPIYDLGAVAMRMLTKIMNKEELEEKEI
VLNHGIRERGTTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=50750 SMULJ23_RS02835 WP_014677851.1 566269..567270(+) (ccpA) [Streptococcus mutans LJ23]
ATGAACACAGATGACACAATCACTATTTATGATGTTGCCCGTGAAGCGGGAGTGTCCATGGCAACTGTCAGCCGTGTTGT
GAATGGAAATAAAAATGTCAAAGAGAATACCCGCAAAAAAGTCCTAGAAGTCATTGACCGTCTTGATTATCGGCCAAATG
CTGTGGCGCGTGGTTTGGCAAGTAAGAAAACGACTACGGTAGGTGTGGTTATCCCTAATATTGCTAATGCTTATTTTTCT
ATTTTAGCTAAGGGAATTGATGACATTGCAACCATGTATAAATATAATATTGTACTGGCTTCAAGTGATGAAGATGACGA
TAAGGAAGTCAATGTTATCAATACTTTATTTGCTAAACAGGTTGATGGTATTATTTTTATGGGACATCATTTAACTGAAA
AAATTCGCGCTGAATTTTCACGAGCACGGACACCGGTTGTTTTATCAGGTACTGTAGATCTGGAGCATCAACTCCCCAGT
GTTAATATTGATCATAGTAAGGCAGCACAAGATGCCGTAGCTTTATTGGCCAAACATCATGATAAGATTGCTTTTGTATC
GGGTCCCCTTATTGATGATATCAATGGCAAGGTACGTCTGGCTGGTTATAAAGAAGGCCTGAAAAAGAAAGGATTGCCTT
TTAAAGAAGGACTTGTTTTTGAAGCTCAATATAAGTATCAAGAAGGATATCAGTTAGCGCAACGTGTCATTAATTCAGGC
GCAACAGCTGCTTATGTTGCTGAGGATGAGTTGGCTGCTGGGCTGTTAAATGGTTTGTTTGCTACTGGTAAGAAAGTCCC
AGAAGACTTTGAAATTATCACGAGTAATGACTCTACTATTGCGCTTTATACTCGTCCTAATATGACATCTATCAGTCAGC
CGATTTATGATTTAGGAGCAGTTGCTATGCGCATGTTAACAAAGATTATGAACAAGGAAGAATTGGAAGAAAAAGAAATT
GTTCTTAATCATGGTATCAGAGAAAGAGGAACAACTAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

78.378

100

0.784

  ccpA Streptococcus pneumoniae D39

75.976

100

0.76

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

55.891

99.399

0.556


Multiple sequence alignment