Detailed information NTG0506800

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: KQY30_RS24090
• Genome accession: NZ_CP077658
• Coordinates: 5693234..5694526 (+)
• Length: 430 a.a.
• NCBI ID: WP_046498884.1
• Uniprot ID: -
• Organism: Streptomyces sp. GMY02
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 5688234..5699526

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KQY30_RS24060 (KQY30_24060)	-	5689208..5689402 (+)	195	WP_046498879.1	hypothetical protein	-
KQY30_RS24075 (KQY30_24075)	tig	5690001..5691428 (+)	1428	WP_217308610.1	trigger factor	-
KQY30_RS24080 (KQY30_24080)	-	5691727..5692332 (+)	606	WP_217311289.1	ATP-dependent Clp protease proteolytic subunit	-
KQY30_RS24085 (KQY30_24085)	clpP	5692406..5693086 (+)	681	WP_269801364.1	ATP-dependent Clp protease proteolytic subunit	Regulator
KQY30_RS24090 (KQY30_24090)	clpX	5693234..5694526 (+)	1293	WP_046498884.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
KQY30_RS24095 (KQY30_24095)	-	5694615..5695553 (-)	939	WP_217308611.1	hypothetical protein	-
KQY30_RS24100 (KQY30_24100)	-	5695690..5698311 (+)	2622	WP_217308612.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 430 a.a.
• Molecular weight: 47026.89 Da
• Isoelectric Point: 4.8824

>NTDB_id=506800 KQY30_RS24090 WP_046498884.1 5693234..5694526(+) (clpX) [Streptomyces sp. GMY02]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGETGSGSGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFDRPALEAIADQAILRGTGARGLRAILEEVLQSVMYEVPSRKDVARVVIT
AAVVRDNVNPTLVPREPRIVKNDGRHEKSA

Nucleotide

• Length: 1293 bp

>NTDB_id=506800 KQY30_RS24090 WP_046498884.1 5693234..5694526(+) (clpX) [Streptomyces sp. GMY02]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGGAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGTCCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAGGAGCTGGCGGAGACCT
CCGAGGTGCGGTGGGAGGAACTGCCCAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGCTACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCGCTCTCGGTGGCGGTCTACAACCACTACAAGCGGGTGCAGGCGGGCGAGACAGGAAGCGGGTCCGGTCG
CGACGACGCGATCGAGCTGGCGAAGTCGAACATCCTGCTGCTGGGGCCGACCGGGTCCGGCAAGACACTGCTCGCGCAGA
CACTGGCCCGGATGCTGAACGTACCGTTCGCCATCGCGGACGCCACGGCGCTGACGGAGGCCGGGTATGTCGGCGAGGAC
GTCGAGAACATTCTGCTGAAGCTGATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCGCGCAAGAGCGAGAACCCATCGATCACACGCGATGTGAGCGGCGAGGGCGTGCAGCAGGCGC
TGCTGAAGATCCTGGAGGGGACGACCGCGTCCGTACCGCCGCAGGGCGGCCGGAAACACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTCTTCATCGTGGGCGGCGCGTTCGCGGGTCTTGAGAAGATCATCGAGTCGCGGGCGGGCGC
GAAGGGGATCGGCTTCGGGGCGACGATCCGCTCGAAGCGGGAGATCGAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCGGAGTTCATCGGCCGGCTGCCGGTCCTGACGTCGGTCCACAACCTGGACCGC
GAGGCGCTGCTCCAGATCCTGGTCGAGCCGCGGAACGCGCTGGTGAAGCAGTATCAGCGGCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGACCGCCCCGCCCTGGAGGCCATCGCCGACCAGGCCATCCTCCGCGGCACCGGCGCCCGCGGCCTGC
GCGCGATCCTCGAAGAGGTCCTCCAGTCGGTGATGTACGAGGTCCCGTCCCGCAAGGACGTCGCCCGCGTGGTCATCACG
GCGGCGGTGGTCCGCGACAACGTGAACCCGACGCTGGTCCCGCGCGAGCCGCGGATCGTGAAGAACGACGGCAGACACGA
GAAGTCGGCGTAA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-396)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.93	93.488	0.598
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.641	95.814	0.514