Detailed information NTG0506701

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: KRR37_RS09535
• Genome accession: NZ_CP077652
• Coordinates: 2133512..2134810 (-)
• Length: 432 a.a.
• NCBI ID: WP_018511479.1
• Uniprot ID: A0ABU2W557
• Organism: Streptomyces sp. HNA39
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2128512..2139810

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KRR37_RS09525 (KRR37_09485)	-	2129638..2132259 (-)	2622	WP_127465506.1	valine--tRNA ligase	-
KRR37_RS09530 (KRR37_09490)	-	2132397..2133428 (+)	1032	WP_248870205.1	hypothetical protein	-
KRR37_RS09535 (KRR37_09495)	clpX	2133512..2134810 (-)	1299	WP_018511479.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
KRR37_RS09540 (KRR37_09500)	clpP	2134968..2135651 (-)	684	WP_070204097.1	ATP-dependent Clp protease proteolytic subunit	Regulator
KRR37_RS09545 (KRR37_09505)	-	2135733..2136338 (-)	606	WP_018487168.1	ATP-dependent Clp protease proteolytic subunit	-
KRR37_RS09550 (KRR37_09510)	tig	2136636..2138030 (-)	1395	WP_127465504.1	trigger factor	-
KRR37_RS09565 (KRR37_09525)	-	2138625..2138819 (-)	195	WP_026237373.1	hypothetical protein	-

Sequence

Protein

• Length: 432 a.a.
• Molecular weight: 47352.23 Da
• Isoelectric Point: 4.8379

>NTDB_id=506701 KRR37_RS09535 WP_018511479.1 2133512..2134810(-) (clpX) [Streptomyces sp. HNA39]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGAGREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIESRAGAKGIGFGATIRSKLEIQASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILIEPRNALVKQYQRLFELDGVELEFEREALEAIADQAILRQTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
PDVVRDHVNPTLVPREPRTIGKNDGGRHEKSA

Nucleotide

• Length: 1299 bp

>NTDB_id=506701 KRR37_RS09535 WP_018511479.1 2133512..2134810(-) (clpX) [Streptomyces sp. HNA39]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGACCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAGGAGCTCGCGGAGACGA
GCGAGGTCCGCTGGGAAGAGCTTCCCAAGCCCCGCGAGATCTACGAGTTCCTGGAGGGGTACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCCCTCTCCGTCGCGGTGTACAACCACTACAAGCGGGTCCAGGCCGGGGAGAACGGCGGCGGTGCCGGTCG
CGAGGACGCGATCGAGCTGGCCAAGTCGAACATCCTGCTGCTGGGCCCCACGGGCTCCGGCAAGACGCTGCTCGCGCAGA
CGCTGGCCCGCATGCTCAACGTCCCGTTCGCCATCGCGGACGCGACGGCTCTGACGGAGGCCGGCTATGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGGAAGAGCGAGAACCCGTCGATCACCCGCGATGTCTCCGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACCACCGCCTCCGTACCGCCGCAGGGCGGACGGAAACACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGCGCCTTCTCCGGACTGGAGAAGATCATCGAGTCCCGGGCCGGCGC
CAAGGGCATCGGGTTCGGTGCCACGATCCGCTCCAAGCTGGAGATCCAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGTCTCCCCGTGCTGACCTCGGTCCACAACCTGGACCGC
GAGGCACTGCTCCAGATCCTCATCGAGCCGCGCAACGCCCTGGTCAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
GGAGCTGGAGTTCGAGCGCGAGGCCCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCCAGACCGGCGCGCGCGGCCTGC
GCGCCATCATGGAGGAAGTCCTCCAGTCCGTGATGTACGAGGTCCCGTCCCGCAAGGACGTCGCCCGTGTCGTCATCACC
CCGGACGTCGTCCGCGACCACGTCAACCCGACGCTGGTCCCGCGCGAGCCGCGCACGATCGGCAAGAACGACGGCGGCCG
CCACGAGAAGTCGGCCTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.93	93.056	0.595
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.155	95.37	0.507