Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   I2437_RS02885 Genome accession   NZ_CP065061
Coordinates   568062..569063 (+) Length   333 a.a.
NCBI ID   WP_165627939.1    Uniprot ID   -
Organism   Streptococcus equi subsp. zooepidemicus strain SEZ33     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 563062..574063
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I2437_RS09700 (IEMOCGPF_00567) - 563455..563589 (+) 135 WP_264947510.1 hypothetical protein -
  I2437_RS02870 (IEMOCGPF_00568) - 563767..565026 (+) 1260 WP_014622678.1 ISL3-like element ISSeq1 family transposase -
  I2437_RS02875 (IEMOCGPF_00569) - 565159..566619 (+) 1461 WP_323126120.1 ABC transporter ATP-binding protein -
  I2437_RS02880 (IEMOCGPF_00570) - 566803..567888 (-) 1086 WP_012679860.1 Xaa-Pro peptidase family protein -
  I2437_RS02885 (IEMOCGPF_00571) ccpA 568062..569063 (+) 1002 WP_165627939.1 catabolite control protein A Regulator
  I2437_RS02890 (IEMOCGPF_00572) - 569133..570608 (+) 1476 WP_165627938.1 alpha-amylase -
  I2437_RS02895 (IEMOCGPF_00573) - 570893..571891 (+) 999 WP_126436925.1 glycosyltransferase -
  I2437_RS02900 (IEMOCGPF_00574) - 571893..573227 (+) 1335 WP_012679857.1 glycosyltransferase family 4 protein -

Sequence

Protein


Download         Length: 333 a.a.        Molecular weight: 36659.76 Da        Isoelectric Point: 5.7642

>NTDB_id=506597 I2437_RS02885 WP_165627939.1 568062..569063(+) (ccpA) [Streptococcus equi subsp. zooepidemicus strain SEZ33]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFS
ILAKGIDDIAAMYKYNIVLASSDEDDDKEVNVVNTLFAKQVDGIIFMGHHLTDKIRAEFSRSRTPIVLAGTVDLDHQLPS
VNIDYKAAVADVVDILAKDHQSIAFVSGPLIDDINGKVRLAGYKDGLKKNKLDFKEGLVFEANYSYKEGFELAQRVINSG
ATAAYVAEDELAAGLLNGLFEAGRRVPEDFEIITSNDSPVVQYTRPNLSSISQPVYDLGAVSMRMLTKIMNKEELEEKEI
LLNHGIKKRGTTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=506597 I2437_RS02885 WP_165627939.1 568062..569063(+) (ccpA) [Streptococcus equi subsp. zooepidemicus strain SEZ33]
ATGAATACAGATGATACAATCACGATTTATGATGTTGCTCGCGAAGCGGGAGTTTCAATGGCGACAGTTAGTCGAGTTGT
AAACGGTAACAAAAATGTAAAGGAAAATACCCGCAAAAAGGTCTTAGAGGTTATTGATCGTCTCGATTATCGTCCAAATG
CTGTTGCTCGTGGTCTTGCAAGTAAAAAGACAACAACAGTCGGTGTTGTGATTCCTAATATTGCAAATAGCTATTTTTCT
ATTCTGGCAAAGGGAATTGATGATATTGCTGCTATGTACAAGTACAATATTGTTCTTGCTTCAAGTGATGAGGACGATGA
TAAAGAGGTCAATGTTGTGAATACCCTCTTTGCAAAGCAGGTCGATGGCATTATTTTCATGGGACATCACTTGACTGACA
AGATTCGGGCAGAGTTTTCTCGTTCGCGTACGCCAATCGTTCTGGCAGGAACGGTTGATCTGGATCATCAGCTGCCAAGT
GTTAACATTGATTATAAGGCGGCTGTTGCTGATGTTGTGGATATTTTAGCTAAAGATCATCAAAGCATTGCCTTTGTTTC
AGGGCCGCTTATTGATGATATCAATGGAAAGGTGCGTTTAGCTGGCTACAAGGACGGACTCAAGAAGAACAAGCTTGATT
TTAAAGAGGGTCTGGTGTTTGAAGCCAACTATTCCTATAAGGAAGGCTTTGAGCTGGCTCAGCGTGTGATCAATTCCGGA
GCGACAGCTGCCTATGTTGCAGAGGACGAGCTGGCAGCAGGCCTTTTGAATGGTCTTTTTGAAGCTGGTAGGCGTGTTCC
AGAGGACTTTGAGATTATCACAAGCAATGATTCTCCAGTGGTTCAGTACACACGTCCAAATTTGAGCTCTATCAGCCAGC
CAGTCTATGACTTGGGTGCTGTTAGCATGCGTATGCTCACTAAGATCATGAATAAGGAAGAATTAGAAGAAAAAGAAATT
TTATTGAACCATGGCATTAAAAAGCGTGGGACAACAAAATAG

Domains

Predicted by InterproScan.

Periplasmic binding protein-like domain (Peripla_BP_3)

(177-332)

Bacterial regulatory proteins, lacI family (LacI)

(8-53)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

78.078

100

0.781
  ccpA Streptococcus pneumoniae D39

76.877

100

0.769
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

54.985

99.399

0.547