Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   I2436_RS06950 Genome accession   NZ_CP065060
Coordinates   1485643..1486644 (-) Length   333 a.a.
NCBI ID   WP_012677612.1    Uniprot ID   A0A6M1KZY1
Organism   Streptococcus equi subsp. zooepidemicus strain SEZ28     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1480643..1491644
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I2436_RS06935 (GDAKBCAL_01391) - 1481480..1482814 (-) 1335 WP_043026197.1 glycosyltransferase family 4 protein -
  I2436_RS06940 (GDAKBCAL_01392) - 1482816..1483814 (-) 999 WP_111690293.1 glycosyltransferase -
  I2436_RS06945 (GDAKBCAL_01393) - 1484098..1485573 (-) 1476 WP_206152721.1 alpha-amylase -
  I2436_RS06950 (GDAKBCAL_01394) ccpA 1485643..1486644 (-) 1002 WP_012677612.1 catabolite control protein A Regulator
  I2436_RS06955 (GDAKBCAL_01395) - 1486818..1487903 (+) 1086 WP_038674132.1 Xaa-Pro peptidase family protein -
  I2436_RS06960 (GDAKBCAL_01396) - 1488270..1488938 (+) 669 WP_111690295.1 NAD(P)H-dependent oxidoreductase -
  I2436_RS06965 (GDAKBCAL_01397) - 1489053..1489979 (+) 927 WP_111690573.1 glycosyltransferase family 2 protein -
  I2436_RS06970 (GDAKBCAL_01398) smpB 1490263..1490730 (-) 468 WP_043984178.1 SsrA-binding protein SmpB -

Sequence

Protein


Download         Length: 333 a.a.        Molecular weight: 36617.72 Da        Isoelectric Point: 5.7618

>NTDB_id=506553 I2436_RS06950 WP_012677612.1 1485643..1486644(-) (ccpA) [Streptococcus equi subsp. zooepidemicus strain SEZ28]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFS
ILAKGIDDIAAMYKYNIVLASSDEDDDKEVNVVNTLFAKQVDGIIFMGHHLTDKIRAEFSRSRTPIVLAGTVDLDHQLPS
VNIDYKAAVADVVDILAKDHQSIAFVSGPLIDDINGKVRLAGYKDGLKKNKLDFKEGLVFEANYSYKEGFDLAQRVINSG
ATAAYVAEDELAAGLLNGLFEAGKRVPEDFEIITSNDSPVVQYTRPNLSSISQPVYDLGAVSMRMLTKIMNKEELEEKEI
LLNHGIKKRGTTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=506553 I2436_RS06950 WP_012677612.1 1485643..1486644(-) (ccpA) [Streptococcus equi subsp. zooepidemicus strain SEZ28]
ATGAATACAGATGATACAATCACGATTTATGATGTTGCTCGCGAAGCGGGAGTTTCAATGGCGACAGTTAGTCGAGTTGT
AAATGGTAACAAAAATGTAAAGGAAAATACCCGCAAAAAGGTCTTAGAGGTTATTGATCGTCTCGATTATCGTCCAAATG
CTGTTGCTCGTGGTCTTGCAAGTAAAAAGACAACAACGGTTGGTGTTGTGATTCCTAATATCGCAAATAGCTATTTTTCT
ATTCTGGCAAAGGGAATTGATGATATTGCTGCTATGTACAAGTACAATATTGTTCTTGCTTCAAGTGATGAGGACGATGA
TAAAGAGGTCAATGTTGTGAATACCCTCTTTGCAAAGCAGGTTGATGGCATTATTTTCATGGGACATCACTTGACTGACA
AGATTCGTGCAGAGTTTTCTCGTTCGCGTACGCCAATTGTTCTGGCAGGAACGGTTGATCTGGATCATCAGCTGCCAAGT
GTTAACATTGATTATAAGGCGGCTGTTGCTGATGTTGTGGACATTTTAGCTAAAGACCACCAAAGCATTGCCTTTGTTTC
AGGGCCGCTCATTGATGATATCAATGGAAAGGTGCGTTTGGCTGGCTACAAGGACGGACTTAAGAAGAACAAGCTTGATT
TTAAAGAGGGTCTGGTGTTTGAAGCCAACTATTCCTATAAGGAAGGCTTTGATTTGGCTCAGCGTGTGATCAATTCCGGA
GCGACAGCTGCCTATGTTGCAGAGGACGAGCTGGCAGCAGGCCTTTTGAATGGTCTTTTTGAAGCTGGCAAGCGTGTTCC
AGAGGACTTTGAGATTATCACAAGCAATGATTCTCCAGTCGTTCAGTACACACGTCCAAATTTGAGCTCTATCAGTCAGC
CAGTCTATGACTTGGGTGCTGTTAGCATGCGTATGCTCACTAAGATCATGAATAAGGAAGAATTAGAAGAAAAAGAAATT
TTATTGAACCATGGCATTAAAAAGCGTGGGACAACAAAATAG

Domains

Predicted by InterproScan.

Periplasmic binding protein-like domain (Peripla_BP_3)

(177-332)

Bacterial regulatory proteins, lacI family (LacI)

(8-53)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6M1KZY1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

78.078

100

0.781
  ccpA Streptococcus pneumoniae D39

76.877

100

0.769
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

54.985

99.399

0.547