Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   I2436_RS06880 Genome accession   NZ_CP065060
Coordinates   1468546..1469355 (-) Length   269 a.a.
NCBI ID   WP_021320992.1    Uniprot ID   A0AAW3GKW3
Organism   Streptococcus equi subsp. zooepidemicus strain SEZ28     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1463546..1474355
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I2436_RS06870 (GDAKBCAL_01378) rnc 1465196..1465888 (-) 693 WP_037581642.1 ribonuclease III -
  I2436_RS06875 (GDAKBCAL_01379) - 1466150..1467664 (-) 1515 WP_206152715.1 helix-turn-helix domain-containing protein -
  I2436_RS06880 (GDAKBCAL_01380) vicX 1468546..1469355 (-) 810 WP_021320992.1 MBL fold metallo-hydrolase Regulator
  I2436_RS06885 (GDAKBCAL_01381) vicK 1469359..1470711 (-) 1353 WP_012677636.1 cell wall metabolism sensor histidine kinase VicK Regulator
  I2436_RS06890 (GDAKBCAL_01382) vicR 1470704..1471414 (-) 711 WP_012515994.1 response regulator YycF Regulator
  I2436_RS06895 (GDAKBCAL_01383) - 1471623..1472639 (-) 1017 WP_206153255.1 DUF3114 domain-containing protein -
  I2436_RS06900 (GDAKBCAL_01384) - 1472685..1473947 (-) 1263 WP_206152716.1 AMP-binding protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30011.07 Da        Isoelectric Point: 5.5344

>NTDB_id=506550 I2436_RS06880 WP_021320992.1 1468546..1469355(-) (vicX) [Streptococcus equi subsp. zooepidemicus strain SEZ28]
MSEVGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRRPEDLDAILITHEHSDHIKGVGIMARKYNLD
VYANEKTWQMIDERHMIGNLDVTQKHVFERGKTMTFGDIDIESFGVSHDAVDPQFYRIMKDNKSFVMLTDTGYVSDRLAG
IIENADGYLIESNHDVEILRAGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGNKTKKIYLGHLSQENNIKELAHMTMVN
QLAMADLGVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=506550 I2436_RS06880 WP_021320992.1 1468546..1469355(-) (vicX) [Streptococcus equi subsp. zooepidemicus strain SEZ28]
ATGAGTGAGGTTGGCTTTAAATATAGTATTTTAGCATCAGGATCGACAGGGAACTGCTTTTACTTGGAAACGCCCAAGAA
GCGGTTGTTGATTGATGCAGGACTGACTGGAAAGAAAATCACTAGTCTCCTTGCTGAGATTGACAGAAGGCCTGAGGATT
TGGATGCTATCTTGATTACCCACGAGCATTCCGACCATATCAAGGGTGTTGGAATCATGGCTCGAAAATATAACCTAGAT
GTCTATGCCAATGAAAAGACTTGGCAGATGATTGATGAGCGTCATATGATTGGCAACCTAGACGTCACACAAAAGCATGT
CTTTGAAAGAGGTAAGACCATGACCTTTGGAGACATTGACATTGAGAGCTTTGGTGTTAGTCATGACGCTGTAGACCCAC
AGTTTTACCGCATTATGAAGGATAACAAGTCCTTTGTCATGCTGACGGATACAGGATATGTGAGCGACCGCTTGGCTGGG
ATCATTGAAAATGCTGACGGCTACTTGATTGAGTCAAATCACGATGTGGAGATATTGCGAGCCGGCTCTTATCCTTGGAG
CCTCAAGCAGCGAATCTTATCTGACCTAGGGCATTTATCCAATGAAGATGGTGCCGGTGCCATGATTCGAAGCTTGGGCA
ATAAAACCAAGAAAATCTATCTCGGTCACCTAAGTCAGGAGAACAATATCAAAGAATTAGCCCACATGACAATGGTCAAT
CAGCTAGCAATGGCAGATTTAGGTGTTGGAACAGATTTTACTGTTCATGACACCTCACCAGATACCGCCTGTCCCTTGAC
AGACATCTAG

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.093

100

0.751