Detailed information NTG0050538

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HPSH112_RS01915
• Genome accession: NC_017741
• Coordinates: 393589..394389 (+)
• Length: 266 a.a.
• NCBI ID: WP_000840094.1
• Uniprot ID: -
• Organism: Helicobacter pylori Shi112
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 388589..399389

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPSH112_RS01880 (HPSH112_01935)	pseH	389091..389633 (+)	543	WP_000742581.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
HPSH112_RS01885 (HPSH112_01940)	-	389566..390504 (-)	939	WP_000833938.1	tetraacyldisaccharide 4'-kinase	-
HPSH112_RS01890 (HPSH112_01945)	-	390501..391283 (-)	783	WP_001168078.1	NAD+ synthase	-
HPSH112_RS01900 (HPSH112_01950)	ilvC	391530..392522 (+)	993	WP_001207777.1	ketol-acid reductoisomerase	-
HPSH112_RS01905 (HPSH112_01955)	minD	392541..393347 (+)	807	WP_001019023.1	septum site-determining protein MinD	-
HPSH112_RS01910 (HPSH112_01960)	minE	393344..393577 (+)	234	WP_000051411.1	cell division topological specificity factor MinE	-
HPSH112_RS01915 (HPSH112_01965)	dprA	393589..394389 (+)	801	WP_000840094.1	DNA-processing protein DprA	Machinery gene
HPSH112_RS01920 (HPSH112_01970)	dprB	394386..394790 (+)	405	WP_000599165.1	Holliday junction resolvase RuvX	Machinery gene
HPSH112_RS08190 (HPSH112_01975)	-	395027..395398 (+)	372	WP_014662205.1	tetratricopeptide repeat protein	-
HPSH112_RS08985	-	395409..395498 (+)	90	WP_411155629.1	hypothetical protein	-
HPSH112_RS01930 (HPSH112_01980)	-	395692..396030 (+)	339	WP_000699918.1	hypothetical protein	-
HPSH112_RS01935 (HPSH112_01985)	-	396014..396574 (+)	561	WP_000037125.1	hypothetical protein	-
HPSH112_RS01940 (HPSH112_01990)	-	396731..397612 (-)	882	WP_001117116.1	RluA family pseudouridine synthase	-
HPSH112_RS01945 (HPSH112_01995)	recJ	397612..399162 (-)	1551	WP_000810779.1	single-stranded-DNA-specific exonuclease RecJ	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29804.66 Da
• Isoelectric Point: 8.5925

>NTDB_id=50538 HPSH112_RS01915 WP_000840094.1 393589..394389(+) (dprA) [Helicobacter pylori Shi112]
MKSNFQYSALENIPKAFDILKDPPKKLYCVGDTKLLDAPLKVAIIGTRRPTPYSKQHTITLAREFAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHKVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDHHLKEMPEIKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=50538 HPSH112_RS01915 WP_000840094.1 393589..394389(+) (dprA) [Helicobacter pylori Shi112]
ATGAAAAGCAACTTCCAATACAGCGCGCTAGAGAATATCCCTAAAGCCTTTGATATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATACAAAGCTTTTAGATGCGCCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTATA
GCAAGCAACACACCATCACTCTAGCCAGAGAGTTTGCTAAAAATGGTGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACGATCATGCTTTCGCCTTGCAGTTTGGATTTTATCTATCCCACGAA
CAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTTATGCCCGTTAAAG
GCTCTTTTTTAGCGAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTAATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGCGCGAGATTAGCCCAAAAGTATCAAAAACCCTTATTTGTTTTGCCCCAGCGCCTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACC
ACCATTTAAAAGAAATGCCTGAAATCAAAGACGAATTTTTAGAATATTGTGCCAAAAACCCAAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGACAAGCTTTTGGAATACGAACTGTTGGGTAAGATTAAACGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.617	100	0.966
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	49.074	81.203	0.398