Detailed information NTG0050515

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HPSH169_RS01805
• Genome accession: NC_017740
• Coordinates: 372000..372800 (+)
• Length: 266 a.a.
• NCBI ID: WP_000840088.1
• Uniprot ID: -
• Organism: Helicobacter pylori Shi169
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 367000..377800

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPSH169_RS01770 (HPSH169_01820)	pseH	367502..368044 (+)	543	WP_000742584.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
HPSH169_RS01775 (HPSH169_01825)	-	367977..368915 (-)	939	WP_000833939.1	tetraacyldisaccharide 4'-kinase	-
HPSH169_RS01780 (HPSH169_01830)	-	368912..369694 (-)	783	WP_001168077.1	NAD+ synthase	-
HPSH169_RS01790 (HPSH169_01835)	ilvC	369941..370933 (+)	993	WP_001207780.1	ketol-acid reductoisomerase	-
HPSH169_RS01795 (HPSH169_01840)	minD	370952..371758 (+)	807	WP_001029119.1	septum site-determining protein MinD	-
HPSH169_RS01800 (HPSH169_01845)	minE	371755..371988 (+)	234	WP_000051411.1	cell division topological specificity factor MinE	-
HPSH169_RS01805 (HPSH169_01850)	dprA	372000..372800 (+)	801	WP_000840088.1	DNA-processing protein DprA	Machinery gene
HPSH169_RS01810 (HPSH169_01855)	dprB	372797..373201 (+)	405	WP_000599239.1	Holliday junction resolvase RuvX	Machinery gene
HPSH169_RS01815 (HPSH169_01865)	-	373435..373803 (+)	369	WP_001059043.1	tetratricopeptide repeat protein	-
HPSH169_RS01820 (HPSH169_01870)	-	373991..374329 (+)	339	WP_000699918.1	hypothetical protein	-
HPSH169_RS01825 (HPSH169_01875)	-	374313..374879 (+)	567	WP_000037138.1	hypothetical protein	-
HPSH169_RS08320 (HPSH169_01880)	-	374891..375109 (+)	219	WP_014661925.1	glycoside hydrolase family protein	-
HPSH169_RS01840 (HPSH169_01890)	-	375423..375803 (+)	381	Protein_355	DUF1294 domain-containing protein	-
HPSH169_RS01845 (HPSH169_01895)	-	375803..376588 (+)	786	WP_000488067.1	hypothetical protein	-
HPSH169_RS01850 (HPSH169_01900)	-	376578..377666 (+)	1089	WP_000426614.1	hypothetical protein	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29800.73 Da
• Isoelectric Point: 8.5925

>NTDB_id=50515 HPSH169_RS01805 WP_000840088.1 372000..372800(+) (dprA) [Helicobacter pylori Shi169]
MKSNFQYSALENIPKAFDILKDPPKKLYCVGDIKLLDAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHKVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDHHLKEMPEMKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=50515 HPSH169_RS01805 WP_000840088.1 372000..372800(+) (dprA) [Helicobacter pylori Shi169]
ATGAAAAGCAACTTCCAATACAGCGCGCTAGAGAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATATAAAGCTTTTAGATGCGCCTTTAAAAGTGGCCATCATCGGCACGAGAAGACCCACCCCTTATA
GCAAGCAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGTGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACGATCATGCTTTCGCCTTGCAGTTTGGATTTTATCTATCCCACGAA
CAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTTATGCCCGTTAAAG
GCTCTTTTTTAGCGAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTAATTATCCCCCAAGCGGATTTGAAAAGCGGC
TCTATGAGTAGCGCGAGATTAGCCCAAAAGTATCAAAAACCCTTATTTGTTTTGCCTCAGCGCCTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACC
ACCATTTAAAAGAAATGCCTGAAATGAAAGACGAATTTTTGGAATATTGTGCCAAAAACCCGAGTTATGAAGAGGCGTAT
CTCAAATTTGGGGACAAGCTTTTAGAATACGAGCTGTTGGGTAAGATTAAACGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.992	100	0.97
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.673	84.962	0.414