Detailed information NTG0050491

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HPSH417_RS01630
• Genome accession: NC_017739
• Coordinates: 332635..333435 (+)
• Length: 266 a.a.
• NCBI ID: WP_000840088.1
• Uniprot ID: -
• Organism: Helicobacter pylori Shi417
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 327635..338435

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPSH417_RS01595 (HPSH417_01640)	pseH	328137..328679 (+)	543	WP_000742644.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
HPSH417_RS01600 (HPSH417_01645)	-	328612..329550 (-)	939	WP_000833956.1	tetraacyldisaccharide 4'-kinase	-
HPSH417_RS01605 (HPSH417_01650)	-	329547..330329 (-)	783	WP_001168222.1	NAD+ synthase	-
HPSH417_RS01615 (HPSH417_01655)	ilvC	330576..331568 (+)	993	WP_001207783.1	ketol-acid reductoisomerase	-
HPSH417_RS01620 (HPSH417_01660)	minD	331587..332393 (+)	807	WP_001019101.1	septum site-determining protein MinD	-
HPSH417_RS01625 (HPSH417_01665)	minE	332390..332623 (+)	234	WP_000051411.1	cell division topological specificity factor MinE	-
HPSH417_RS01630 (HPSH417_01670)	dprA	332635..333435 (+)	801	WP_000840088.1	DNA-processing protein DprA	Machinery gene
HPSH417_RS01635 (HPSH417_01675)	dprB	333432..333836 (+)	405	WP_000599174.1	Holliday junction resolvase RuvX	Machinery gene
HPSH417_RS01640 (HPSH417_01685)	-	334008..334439 (+)	432	WP_000954139.1	tetratricopeptide repeat protein	-
HPSH417_RS01645 (HPSH417_01690)	-	334627..334965 (+)	339	WP_000699918.1	hypothetical protein	-
HPSH417_RS01650 (HPSH417_01695)	-	334949..335515 (+)	567	WP_000037149.1	hypothetical protein	-
HPSH417_RS08505 (HPSH417_01700)	-	335527..335745 (+)	219	WP_014661925.1	glycoside hydrolase family protein	-
HPSH417_RS01665 (HPSH417_01710)	-	336059..336439 (+)	381	Protein_321	DUF1294 domain-containing protein	-
HPSH417_RS01670 (HPSH417_01715)	-	336439..337224 (+)	786	WP_000488068.1	hypothetical protein	-
HPSH417_RS01675 (HPSH417_01720)	-	337214..338302 (+)	1089	WP_000426582.1	hypothetical protein	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29800.73 Da
• Isoelectric Point: 8.5925

>NTDB_id=50491 HPSH417_RS01630 WP_000840088.1 332635..333435(+) (dprA) [Helicobacter pylori Shi417]
MKSNFQYSALENIPKAFDILKDPPKKLYCVGDIKLLDAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHKVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDHHLKEMPEMKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=50491 HPSH417_RS01630 WP_000840088.1 332635..333435(+) (dprA) [Helicobacter pylori Shi417]
ATGAAAAGCAACTTCCAATACAGCGCGCTAGAGAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATATAAAGCTTTTAGATGCGCCTTTAAAAGTGGCCATCATCGGCACGAGAAGACCCACCCCTTATA
GCAAGCAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGTGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACGATCATGCTTTCGCCTTGCAGTTTGGATTTTATCTATCCCACGAA
CAACCATAAAGTGATCCAAGAAATCGCACAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTTATGCCCGTTAAAG
GCTCTTTTTTAGCGAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTAATTATCCCCCAAGCGGATTTGAAAAGCGGC
TCTATGAGTAGCGCGAGATTAGCCCAAAAGTATCAAAAACCCTTATTTGTTTTGCCTCAGCGCCTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTCAATATTCAAAATTTTATAAACACCCTTTTAAAAGACC
ACCATTTAAAAGAAATGCCTGAAATGAAAGACGAATTTTTGGAATATTGTGCCAAAAACCCGAGCTATGAAGAAGCGTAT
CTCAAATTTGGGGACAAGCTTTTAGAATACGAGCTGTTGGGTAAGATTAAACGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.992	100	0.97
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.673	84.962	0.414