Detailed information NTG0504906

Bioinformatically predicted

Overview

• Name: pilW
• Type: Machinery gene
• Locus tag: KQ254_RS04410
• Genome accession: NZ_CP076807
• Coordinates: 930139..931176 (+)
• Length: 345 a.a.
• NCBI ID: WP_106439669.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain UC20804
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 925139..936176

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KQ254_RS04375 (KQ254_04355)	-	926799..926929 (-)	131	Protein_837	hypothetical protein	-
KQ254_RS04380 (KQ254_04360)	rpoZ	926968..927246 (-)	279	WP_000135049.1	DNA-directed RNA polymerase subunit omega	-
KQ254_RS04385 (KQ254_04365)	gmk	927319..927948 (-)	630	WP_000015937.1	guanylate kinase	-
KQ254_RS04390 (KQ254_04370)	ispH	928071..929021 (+)	951	WP_000407064.1	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	-
KQ254_RS04395 (KQ254_04375)	-	929034..929282 (-)	249	Protein_841	hypothetical protein	-
KQ254_RS04400 (KQ254_04380)	fimU	929191..929640 (+)	450	WP_004745398.1	GspH/FimT family pseudopilin	Machinery gene
KQ254_RS04405 (KQ254_04385)	pilV	929637..930137 (+)	501	WP_106439670.1	type IV pilus modification protein PilV	Machinery gene
KQ254_RS04410 (KQ254_04390)	pilW	930139..931176 (+)	1038	WP_106439669.1	PilW family protein	Machinery gene
KQ254_RS04415 (KQ254_04395)	-	931173..931955 (+)	783	WP_031963609.1	pilus assembly PilX N-terminal domain-containing protein	-
KQ254_RS04420 (KQ254_04400)	-	931971..935648 (+)	3678	WP_212294747.1	PilC/PilY family type IV pilus protein	-
KQ254_RS04425 (KQ254_04405)	pilY2	935662..936138 (+)	477	WP_004745410.1	type IV pilin protein	Machinery gene

Sequence

Protein

• Length: 345 a.a.
• Molecular weight: 37481.35 Da
• Isoelectric Point: 7.8380

>NTDB_id=504906 KQ254_RS04410 WP_106439669.1 930139..931176(+) (pilW) [Acinetobacter baumannii strain UC20804]
MKKHQGFTLIELILSLALGLIITAAAILLFLTSQKSLSIQVGVSDLQDNANFGLNYLSQDIRLANLNNPKAVINDQTAYG
GIVLTSAINSAKDAANEPLSNLYKTIIGVTANTNLLSRSQGHSVGSGNAWTGASNVQSNGSDIASDQLVIQYVPQYTIDT
KSTATQADDEYIGGTDCEGNNLNFPLASGRQVIIQRYFLRKDAKNNSDEPNQPLALACDAGYYPLTGNPTAVTRYGDAGE
IIMKRVDYFRVLLNVQGNSGRRYISIHDYLNLTAPRPRIVSVQIGLLTRSLQPVGAEIAIKDDQQFSVLDQTLTVKKTEN
STKKYVRQVISQTIALRNVIGERGE

Nucleotide

• Length: 1038 bp

>NTDB_id=504906 KQ254_RS04410 WP_106439669.1 930139..931176(+) (pilW) [Acinetobacter baumannii strain UC20804]
ATGAAAAAGCATCAAGGTTTTACATTAATCGAGTTAATACTTTCGTTAGCCTTAGGTCTTATAATTACTGCAGCTGCAAT
ATTATTATTTTTGACTAGTCAAAAAAGTTTATCTATTCAGGTCGGAGTGTCTGATTTACAAGATAATGCTAATTTTGGAC
TTAACTATTTATCTCAAGATATTCGTCTTGCAAATTTAAATAACCCCAAAGCAGTTATTAATGATCAAACTGCTTATGGC
GGTATTGTTTTAACCTCTGCGATTAATTCGGCTAAAGATGCTGCTAATGAACCTCTTAGTAATCTATATAAAACTATTAT
TGGGGTAACTGCTAACACTAATTTACTTTCACGTAGTCAGGGACATAGTGTCGGTAGTGGTAATGCTTGGACGGGAGCGT
CAAACGTCCAAAGTAATGGAAGTGATATCGCTAGTGACCAACTCGTTATTCAATATGTACCACAATATACAATTGATACA
AAAAGTACTGCAACTCAAGCTGATGATGAATATATAGGCGGTACAGATTGCGAAGGAAATAATCTGAATTTTCCTCTTGC
TAGTGGGCGTCAAGTCATAATACAACGTTATTTTTTACGTAAAGACGCTAAAAATAATAGTGATGAACCTAACCAACCTT
TAGCACTTGCTTGTGATGCCGGCTATTACCCATTAACTGGTAACCCAACTGCTGTAACTCGTTATGGGGATGCAGGTGAA
ATTATAATGAAACGTGTGGATTATTTTCGGGTTTTACTAAATGTTCAAGGGAATTCTGGACGACGTTATATTTCAATACA
TGATTATTTGAACTTGACAGCTCCTCGGCCACGTATTGTTTCAGTCCAAATTGGCTTATTAACACGTTCATTGCAACCTG
TAGGTGCAGAAATAGCAATTAAAGATGATCAACAATTTTCTGTATTAGATCAAACACTCACAGTAAAAAAAACTGAAAAT
TCGACAAAAAAATATGTGCGTCAAGTGATATCACAAACCATTGCCTTGCGTAATGTGATCGGGGAGCGTGGTGAATGA

Domains

Predicted by InterProScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (1-26)

• Type IV Pilus-assembly protein W (PilW) (197-338)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilW	Acinetobacter baumannii D1279779	39.496	100	0.409