Detailed information NTG0050488

Bioinformatically predicted

Overview

• Name: rexA
• Type: Machinery gene
• Locus tag: SII_RS02340
• Genome accession: NC_022237
• Coordinates: 456565..460245 (+)
• Length: 1226 a.a.
• NCBI ID: WP_020998419.1
• Uniprot ID: -
• Organism: Streptococcus intermedius C270
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 451565..465245

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SII_RS02330 (SII_0460)	-	451960..453174 (+)	1215	WP_020998417.1	ABC transporter permease	-
SII_RS02335 (SII_0461)	rexB	453296..456568 (+)	3273	WP_020998418.1	ATP-dependent nuclease subunit B	Machinery gene
SII_RS02340 (SII_0462)	rexA	456565..460245 (+)	3681	WP_020998419.1	helicase-exonuclease AddAB subunit AddA	Machinery gene
SII_RS02345 (SII_0463)	glgB	460760..462670 (+)	1911	WP_009569031.1	1,4-alpha-glucan branching protein GlgB	-
SII_RS02350 (SII_0464)	-	462674..463816 (+)	1143	WP_003072133.1	glucose-1-phosphate adenylyltransferase	-
SII_RS02355 (SII_0465)	glgD	463806..464945 (+)	1140	WP_020998420.1	glucose-1-phosphate adenylyltransferase subunit GlgD	-

Sequence

Protein

• Length: 1226 a.a.
• Molecular weight: 141421.26 Da
• Isoelectric Point: 5.9519

>NTDB_id=50488 SII_RS02340 WP_020998419.1 456565..460245(+) (rexA) [Streptococcus intermedius C270]
MKRLPFLNQAEICALQHQEAQSNKTQKRTAEQIEAIYSSGQNLLVSASAGSGKTFVMVQRIIDQIMRGVRIEQLFVSTFT
VKAASELKERLEQELSKALKETTNEELKQHLAQQLADIPNADIGTMDSFTQKVLNKYGYLLELAPNFRILQSASEQLLLQ
NEVFEQVFEDFYQSDQAALFKKMVKNFTGQRKDLYGFREQVYKIYSFLQSTSNPIEWLEKDFLKGYEFADFQEEKAQLLT
KTKEAFFDLEDFFRYHLIHEAKEFPKAKYLENVQRVLDGLSSLQGHSSEEVYLTALNHIVEISRDSNGKALTNSGRKEEL
KEIINAYNEKRKEKIQVLRDLADQFYRFEFQMTYHEEAKEILLVLQQFMKSFVTSYLNRKKEENAFEFADISHFAIQILE
ECSDVRQFYRNKYHEVMVDEYQDTNHTQERMLELLSNGDNRFMVGDIKQSIYRFRQADPQIFNEKFKTYKEDSSQGKLIV
LKENFRSHLEVLEATNDVFKRLMDEEVGEIDYNETHYLVAGNPDKKELNPLYQTEFLIYDGALEADKEENDKEVSSVSAG
EVELVIKEIIRLYNEENVQFEDITLLTASRTRNDVILAEFAKYGIPVVSDGGEDNYLQSVEVMVMLDTLRTINNPLNDYA
LVALLKSPMFNFTEDELARLALQKKVTEANYVAHQENLYEKLKNALNGYGQYPELITPPLLKKIQQFQGTLQAWREYAKT
NSLYDLLWKIYQDRFYYDYVGALPNGAGRQANLYALTLRANDYEKMSFKGLSRFIGMIDKILETQNDLASVVSAAPKHAV
RLMTVHKSKGLEFKYVFLLNMDKVFNRKDGSSALILSRQNGVGIKYVADVAVDVADKLAPNHVRLSIDTLPYEQNEREIH
LASISEQMRLLYVAMTRAERKLYLVGKGHQNSLEKKSFPTPVKGHLAASIRQSMTSFQDWMWALHVVFEKDNLAFSTRFV
TDNDLTSEKIGQLKLKDAVIEEDLIDNRQSKDIRRALDILENVDRLNTQYRAAIHLPSVQTPSQIKKFYEPVIDTDGVEI
MEKRNPTIVGKASFELPNFAKKAPVTGAQIGSAVHELMQRIPLDQAPTIAILRKVLKQVQAEASVKKKIDLQKIASFFGT
ELGQLLLKYTDRVYREAPFAMLKQDPASGQDFVVRGILDGYLLLADRIILFDYKTDQYTHSSELVKRYRGQLALYAEALR
RSYGIEKIEKYLVLLGESQLQVVKVD

Nucleotide

• Length: 3681 bp

>NTDB_id=50488 SII_RS02340 WP_020998419.1 456565..460245(+) (rexA) [Streptococcus intermedius C270]
ATGAAGAGACTACCATTTTTGAATCAAGCAGAAATTTGTGCTTTGCAGCATCAAGAAGCACAGTCTAATAAAACTCAAAA
ACGTACAGCAGAGCAAATCGAAGCCATCTACTCCTCTGGTCAAAACCTTCTCGTGTCTGCTTCTGCAGGATCAGGAAAAA
CCTTTGTAATGGTGCAGCGGATTATTGATCAAATTATGCGGGGAGTTCGTATTGAGCAGCTCTTCGTTTCAACTTTCACC
GTAAAAGCAGCTAGTGAATTAAAAGAGCGCTTGGAGCAAGAGTTGTCCAAGGCCTTGAAAGAAACAACTAATGAGGAACT
TAAACAGCACTTGGCACAGCAATTAGCTGATATTCCCAATGCAGATATTGGAACTATGGATTCTTTCACTCAAAAAGTCC
TAAATAAATATGGTTATCTGTTGGAGTTGGCACCAAATTTTCGCATTTTACAAAGTGCGAGTGAACAATTATTGCTACAA
AACGAAGTTTTTGAGCAAGTTTTTGAAGACTTCTATCAATCTGATCAGGCAGCTTTGTTTAAAAAAATGGTCAAAAACTT
TACAGGTCAGAGGAAAGATTTGTATGGTTTCCGAGAGCAGGTTTATAAGATTTATTCTTTTTTGCAGTCTACTAGTAATC
CAATAGAATGGTTGGAAAAAGACTTTTTGAAAGGCTATGAGTTTGCAGATTTCCAAGAAGAGAAAGCACAACTCTTAACG
AAGACTAAAGAAGCCTTCTTTGATTTAGAAGATTTTTTCCGTTATCATTTGATCCATGAAGCCAAGGAATTTCCCAAAGC
AAAATATCTTGAAAATGTGCAGCGTGTGCTTGATGGCCTTTCAAGTTTACAAGGGCATTCCTCTGAGGAAGTCTATCTCA
CAGCGCTCAATCATATTGTAGAAATATCGCGTGACAGCAATGGAAAAGCCTTGACGAACAGCGGTCGTAAAGAAGAATTA
AAAGAAATCATCAACGCCTATAACGAAAAACGCAAAGAAAAAATTCAAGTTCTACGAGACTTGGCGGATCAATTTTATCG
TTTTGAATTTCAAATGACCTACCATGAGGAAGCAAAAGAAATTTTGCTTGTTTTGCAGCAATTTATGAAATCGTTTGTTA
CAAGCTATTTGAATCGTAAAAAAGAAGAAAATGCTTTTGAATTTGCGGACATTAGTCATTTTGCTATTCAGATTTTAGAA
GAATGTTCGGATGTGCGTCAGTTTTATAGAAACAAATACCATGAAGTTATGGTAGATGAATATCAAGATACTAACCACAC
GCAAGAGCGGATGCTAGAACTGTTATCAAATGGGGATAATCGCTTTATGGTGGGGGATATTAAACAGTCTATTTACCGTT
TTCGTCAAGCGGATCCGCAGATTTTCAATGAGAAATTCAAAACCTATAAAGAAGATAGCAGCCAAGGGAAATTGATTGTT
TTAAAAGAGAATTTTCGCAGTCATTTGGAAGTCTTGGAAGCCACCAATGATGTTTTTAAGCGCCTCATGGATGAGGAAGT
GGGAGAAATTGATTACAATGAAACGCATTATCTGGTAGCTGGAAATCCTGATAAAAAAGAACTAAATCCCTTGTATCAGA
CAGAATTTCTCATTTATGATGGAGCGCTTGAAGCGGATAAGGAGGAGAATGACAAGGAGGTTTCTTCTGTTTCTGCAGGA
GAAGTAGAACTGGTAATTAAAGAAATTATTCGCCTGTACAATGAAGAAAATGTCCAATTTGAGGATATTACTTTGCTAAC
GGCTTCGCGGACGCGCAACGATGTGATTTTAGCTGAATTTGCTAAATATGGTATTCCTGTCGTTTCAGACGGTGGTGAGG
ACAATTACCTTCAGTCTGTTGAAGTCATGGTGATGTTAGATACCTTGCGTACAATTAACAACCCTCTCAATGATTATGCT
TTAGTGGCACTTTTAAAATCGCCAATGTTCAACTTTACAGAAGATGAATTGGCACGTTTAGCTTTGCAAAAGAAGGTGAC
TGAGGCGAATTATGTTGCCCATCAGGAAAATCTCTATGAGAAGTTGAAGAATGCTCTGAATGGGTACGGGCAATATCCTG
AACTTATCACGCCTCCTCTTTTAAAAAAAATCCAGCAATTTCAAGGAACACTACAGGCTTGGCGAGAGTATGCAAAAACA
AATTCACTATATGATTTGCTTTGGAAAATTTATCAAGATCGCTTTTATTACGATTATGTGGGAGCTTTACCAAATGGAGC
GGGACGTCAGGCCAATCTTTATGCACTGACCTTACGAGCAAATGATTACGAAAAAATGAGTTTTAAAGGCTTGTCACGTT
TTATTGGGATGATTGATAAAATCTTGGAAACACAGAATGATTTAGCCAGTGTAGTCAGTGCAGCTCCGAAACATGCGGTT
CGCCTGATGACGGTTCATAAGAGCAAAGGTTTGGAATTTAAATATGTCTTTTTGCTCAATATGGACAAAGTATTTAATCG
TAAAGATGGCAGTTCTGCTTTGATTCTCAGTCGTCAAAATGGTGTTGGAATCAAGTATGTGGCTGATGTTGCAGTAGATG
TTGCTGATAAGTTAGCTCCAAACCATGTTCGTTTGTCTATTGATACTCTGCCTTATGAGCAAAATGAACGTGAGATCCAT
TTAGCCAGTATTTCGGAACAAATGCGTCTACTCTATGTCGCCATGACACGCGCTGAAAGGAAACTGTATTTAGTTGGTAA
AGGTCATCAGAACAGTTTGGAGAAAAAAAGCTTCCCTACTCCAGTGAAGGGGCATTTAGCTGCATCTATCAGGCAAAGTA
TGACAAGTTTTCAAGATTGGATGTGGGCTTTACATGTAGTATTTGAGAAAGATAATCTAGCTTTTTCAACGCGATTTGTG
ACAGATAATGACTTGACAAGTGAAAAAATAGGTCAACTGAAATTGAAAGATGCGGTTATTGAAGAGGATTTAATAGACAA
TCGCCAATCTAAGGATATTCGCAGGGCTTTGGATATTTTGGAAAATGTAGATCGACTGAATACTCAGTATCGAGCTGCCA
TTCATCTACCGAGTGTTCAAACACCAAGTCAAATCAAGAAATTTTATGAACCAGTTATAGATACAGATGGCGTTGAAATT
ATGGAGAAAAGGAATCCGACCATTGTAGGAAAAGCTTCTTTTGAGCTACCAAATTTTGCTAAAAAAGCTCCAGTTACAGG
AGCGCAAATTGGTAGCGCCGTCCATGAATTGATGCAGCGTATTCCTTTGGATCAAGCCCCTACGATAGCTATTTTGAGAA
AAGTTTTAAAACAGGTTCAGGCAGAAGCAAGTGTTAAAAAGAAAATTGATTTGCAAAAGATAGCTAGTTTCTTTGGGACT
GAACTTGGACAGCTCCTTTTGAAGTATACAGACAGAGTATATCGTGAAGCCCCTTTTGCTATGTTAAAGCAGGATCCAGC
AAGTGGACAAGATTTTGTTGTTCGTGGGATATTAGATGGCTATCTTCTATTAGCTGACCGAATTATTCTCTTTGACTATA
AAACGGATCAATACACTCATTCAAGTGAATTAGTCAAACGATACCGAGGGCAATTAGCACTTTATGCCGAAGCTCTTAGG
CGTTCATATGGTATTGAAAAAATTGAAAAATACCTAGTGCTACTAGGTGAATCTCAACTTCAAGTAGTCAAGGTGGATTA
G

Domains

Predicted by InterProScan.

• UvrD-like helicase C-terminal domain (UvrD_C) (479-904)

• UvrD/REP helicase N-terminal domain (UvrD-helicase) (29-469)

• PD-(D/E)XK nuclease superfamily (PDDEXK_1) (1068-1204)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rexA	Streptococcus pneumoniae R6	60	99.918	0.6