Detailed information NTG0050478

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: SII_RS01510
• Genome accession: NC_022237
• Coordinates: 302964..305789 (+)
• Length: 941 a.a.
• NCBI ID: WP_020998327.1
• Uniprot ID: -
• Organism: Streptococcus intermedius C270
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 297964..310789

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SII_RS01475 (SII_0291)	-	297970..298797 (+)	828	WP_020998324.1	hypothetical protein	-
SII_RS01480 (SII_0292)	rpsF	299086..299376 (+)	291	WP_003074536.1	30S ribosomal protein S6	-
SII_RS01485 (SII_0293)	ssbA	299388..299858 (+)	471	WP_020998325.1	single-stranded DNA-binding protein	Machinery gene
SII_RS01490 (SII_0294)	rpsR	299895..300134 (+)	240	WP_000068664.1	30S ribosomal protein S18	-
SII_RS01495 (SII_0295)	-	300543..301052 (+)	510	WP_020998326.1	GNAT family N-acetyltransferase	-
SII_RS01500 (SII_0296)	-	301204..301881 (-)	678	WP_003074532.1	DUF1129 domain-containing protein	-
SII_RS01505 (SII_0297)	-	301897..302841 (-)	945	WP_003070861.1	magnesium transporter CorA family protein	-
SII_RS01510 (SII_0298)	uvrA	302964..305789 (+)	2826	WP_020998327.1	excinuclease ABC subunit UvrA	Machinery gene
SII_RS01515 (SII_0299)	-	305827..306582 (-)	756	WP_003074527.1	hypothetical protein	-
SII_RS01520 (SII_0300)	-	306730..307791 (+)	1062	WP_020998328.1	M24 family metallopeptidase	-
SII_RS01525 (SII_0301)	efp	307850..308410 (+)	561	WP_003026309.1	elongation factor P	-
SII_RS01530 (SII_0302)	-	308521..308910 (+)	390	WP_003074522.1	Asp23/Gls24 family envelope stress response protein	-
SII_RS01535 (SII_0303)	nusB	308903..309328 (+)	426	WP_003077471.1	transcription antitermination factor NusB	-
SII_RS01540 (SII_0304)	comR/comR2	309330..309842 (+)	513	WP_041823110.1	hypothetical protein	Regulator

Sequence

Protein

• Length: 941 a.a.
• Molecular weight: 103914.38 Da
• Isoelectric Point: 6.7150

>NTDB_id=50478 SII_RS01510 WP_020998327.1 302964..305789(+) (uvrA) [Streptococcus intermedius C270]
MQDKIIIHGARAHNLKNVDVTIPRDKLVVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLGNMEKPDVDSIDGL
SPAISIDQKTTSKNPRSTVGTVTEINDYLRLLYARVGTPYCINGHGAIKASSVEQIVNQVLELPERQRLQILAPIIRKKK
GQHKTIFDKIQKDGYVRVRVDGDIYDVTEVPELSKTKKHDIEVVVDRIVIKKSVRSRLFDSIEAALRLAEGYVVIDTMDG
KELLFSEHYACPVCGFTVPELEPRLFSFNAPFGSCSDCDGLGIKLEVDLDLVVPDSSKTLREGALAPWNPISSSYYPQML
AQAMEAFGIEMDKPFEELSEEEKQLIFFGSDGREFHFHYENEFGGVRDIDIPFEGVVTNINRRYHETNSDFTRSQMRLYM
NELTCASCHGYRLNPQALSVKVGGEGGLNIGQVSDLSIADHLELLSHLTLTENEVAIATPIIKEIRDRLTFLHNVGLNYL
TLSRSAGTLSGGESQRIRLATQIGSNLSGVLYILDEPSIGLHQRDNNRLIASLKKMRDLGNTLIVVEHDEDTMREADWLI
DVGPGAGVFGGEIVAAGTPEQVAKSKKSITGQYLSGKREIPVPLERRVGNGRFIEVTGAREHNLQNITARFPLGKFIAVT
GVSGSGKSTLVNSILKKAIAQKLNRNSDKPGKFKNISGIEYIDRLIDIDQSPIGRTPRSNPATYTGVFDDIRDLFAKTNE
AKIRGYKKGRFSFNVKGGRCEACSGDGIIKIEMHFLPDVYVPCEVCHGTRYNSETLEVHYKEKNIAQVLDMTVNDAVEFF
KHIPKIERKLQTIKDVGLGYVTLGQPATTLSGGEAQRMKLASELHKRSTGKSFYILDEPTTGLHTEDIAKLLQVLSRFVD
DGNTVLVIEHNLDVIKTADHIIDLGPEGGIGGGTIIATGTPEEVAANSASYTGQYLKGKLK

Nucleotide

• Length: 2826 bp

>NTDB_id=50478 SII_RS01510 WP_020998327.1 302964..305789(+) (uvrA) [Streptococcus intermedius C270]
ATGCAGGATAAAATTATCATTCATGGAGCGCGAGCCCATAATTTAAAAAATGTTGATGTTACGATTCCGCGGGACAAGTT
GGTTGTAGTGACAGGGCTGTCTGGTTCAGGCAAGTCTAGCTTAGCTTTTGATACTCTCTATGCAGAGGGACAACGGCGTT
ATGTAGAAAGCCTGTCGGCTTATGCCCGTCAATTTTTGGGCAACATGGAAAAACCAGATGTGGATTCAATTGACGGTCTT
AGCCCTGCTATTTCCATTGACCAAAAAACGACTAGCAAGAATCCTCGTTCAACAGTCGGAACAGTTACAGAAATCAATGA
TTATCTCCGTTTGCTCTATGCGCGTGTGGGAACTCCATATTGTATCAATGGGCATGGAGCCATTAAAGCTTCTTCTGTAG
AACAAATCGTCAATCAAGTTTTGGAATTACCCGAACGTCAGAGATTACAAATTCTAGCGCCAATTATCCGTAAGAAAAAA
GGACAGCACAAGACAATCTTTGATAAAATTCAAAAAGATGGATATGTTCGGGTGCGCGTGGATGGAGATATTTATGATGT
TACCGAAGTCCCAGAGCTTTCTAAAACGAAAAAGCACGATATCGAAGTAGTGGTGGATCGGATTGTCATTAAGAAGAGTG
TACGCAGTCGATTATTTGATTCGATTGAAGCAGCTTTAAGACTTGCGGAAGGCTACGTGGTGATTGATACGATGGATGGC
AAAGAATTACTCTTTTCCGAGCATTATGCCTGTCCAGTCTGTGGTTTTACGGTTCCTGAACTCGAACCGCGCCTTTTCTC
TTTTAATGCCCCATTTGGATCCTGCTCTGACTGTGACGGCTTAGGTATCAAGTTAGAGGTTGATTTGGATCTTGTAGTGC
CTGATAGTAGTAAAACATTACGTGAAGGAGCTCTAGCACCGTGGAATCCAATTTCTTCTAGCTATTATCCGCAAATGTTA
GCTCAGGCGATGGAAGCCTTTGGCATCGAGATGGATAAGCCTTTTGAGGAATTGAGTGAGGAAGAAAAACAGCTGATTTT
CTTTGGCTCAGATGGTCGGGAGTTCCATTTTCACTATGAAAATGAATTTGGTGGCGTGCGGGATATCGACATCCCTTTTG
AAGGAGTAGTAACCAATATCAACCGCCGCTATCATGAAACTAACAGTGATTTTACCCGTAGCCAAATGCGTCTTTATATG
AATGAGTTGACTTGTGCAAGTTGCCATGGTTATCGATTGAATCCACAAGCCTTGTCTGTTAAAGTGGGGGGTGAAGGTGG
TCTTAATATTGGGCAAGTATCTGATTTGTCTATTGCAGATCATTTAGAATTACTTTCTCATCTGACTTTGACTGAAAATG
AAGTGGCCATTGCAACACCGATTATTAAAGAAATTCGCGATCGCTTGACTTTTCTTCATAATGTCGGGCTTAATTATCTA
ACTCTATCTCGTTCTGCGGGAACATTGTCGGGTGGTGAGAGTCAGCGGATTCGCTTGGCAACTCAAATTGGTTCCAATCT
CAGTGGTGTTCTTTATATCTTGGATGAACCCTCTATTGGTCTACACCAGCGGGATAACAATCGCTTGATTGCCAGTCTCA
AAAAAATGCGTGATTTGGGCAATACTCTCATTGTGGTTGAACATGATGAAGATACTATGCGCGAAGCTGATTGGTTGATT
GATGTTGGACCTGGAGCAGGTGTTTTTGGTGGTGAAATTGTTGCGGCAGGCACTCCAGAGCAAGTTGCAAAAAGCAAGAA
ATCAATTACAGGTCAGTATTTATCGGGCAAACGTGAAATTCCAGTGCCATTGGAGCGTCGCGTAGGAAACGGCCGCTTTA
TTGAAGTAACAGGTGCGCGAGAGCACAATTTGCAAAACATCACGGCCCGCTTCCCGTTAGGAAAATTTATAGCCGTGACG
GGAGTTTCCGGTTCTGGGAAATCCACCTTGGTTAATTCCATTTTGAAAAAAGCAATCGCTCAAAAGCTCAATCGTAATTC
AGACAAACCAGGTAAATTCAAAAATATTTCAGGCATTGAGTATATTGATCGTTTGATTGATATTGACCAGAGCCCGATTG
GCCGAACACCAAGATCCAATCCAGCGACGTATACTGGCGTCTTTGATGATATTCGCGATCTCTTTGCTAAGACTAACGAA
GCTAAGATTCGTGGGTATAAAAAAGGGCGTTTCTCTTTCAATGTGAAGGGGGGACGCTGCGAGGCCTGCTCTGGGGATGG
GATTATCAAGATTGAGATGCACTTTTTACCAGATGTTTATGTCCCTTGTGAGGTTTGCCATGGAACACGGTACAATAGTG
AAACCTTGGAAGTGCACTACAAAGAGAAAAATATTGCTCAAGTTTTGGATATGACAGTTAATGATGCAGTGGAATTTTTT
AAGCATATTCCTAAAATTGAGCGGAAACTTCAGACCATCAAAGACGTAGGACTAGGATATGTAACGTTAGGACAACCTGC
CACAACTCTTTCTGGTGGGGAGGCTCAGCGGATGAAACTAGCCAGCGAACTTCACAAGCGCTCAACAGGTAAGTCTTTCT
ATATTCTGGATGAACCAACTACAGGTCTGCACACGGAGGATATTGCGAAACTTCTCCAAGTGCTATCACGTTTTGTAGAC
GATGGCAATACGGTTCTCGTCATCGAGCATAATCTGGACGTCATTAAGACGGCTGATCACATCATTGACCTTGGACCAGA
AGGTGGTATTGGTGGAGGTACTATTATTGCTACTGGTACACCAGAAGAAGTAGCTGCAAACTCTGCTAGCTATACTGGCC
AGTATCTAAAAGGAAAGTTAAAATAA

Domains

Predicted by InterProScan.

• UvrA interaction domain (UvrA_inter) (132-238)

• ABC transporter (ABC_tran) (624-860)

• UvrA DNA-binding domain (UvrA_DNA-bind) (288-396)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	89.681	99.894	0.896
uvrA	Streptococcus pneumoniae TIGR4	89.681	99.894	0.896
uvrA	Streptococcus pneumoniae D39	89.681	99.894	0.896