Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG   Type   Machinery gene
Locus tag   KQ252_RS08370 Genome accession   NZ_CP076801
Coordinates   1740051..1742096 (+) Length   681 a.a.
NCBI ID   WP_002068928.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain UC25604     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1735051..1747096
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KQ252_RS08355 (KQ252_08340) plsB 1735532..1738105 (+) 2574 WP_032030098.1 glycerol-3-phosphate 1-O-acyltransferase PlsB -
  KQ252_RS08360 (KQ252_08345) adeT2 1738149..1739135 (-) 987 WP_000712910.1 putative multidrug efflux protein AdeT2 -
  KQ252_RS08365 (KQ252_08350) - 1739215..1740030 (-) 816 WP_000547774.1 NAD(P)H-binding protein -
  KQ252_RS08370 (KQ252_08355) recG 1740051..1742096 (+) 2046 WP_002068928.1 ATP-dependent DNA helicase RecG Machinery gene
  KQ252_RS08375 (KQ252_08360) comF 1742089..1742724 (+) 636 WP_045900139.1 ComF family protein Machinery gene
  KQ252_RS08380 (KQ252_08365) - 1742727..1743128 (-) 402 WP_000849705.1 NUDIX domain-containing protein -
  KQ252_RS08385 (KQ252_08370) - 1743143..1743724 (-) 582 WP_001084310.1 TIGR00730 family Rossman fold protein -
  KQ252_RS08390 (KQ252_08375) - 1743882..1744895 (+) 1014 WP_000888321.1 CorA family divalent cation transporter -
  KQ252_RS08395 (KQ252_08380) - 1744965..1745252 (-) 288 WP_000250997.1 lipid asymmetry maintenance protein MlaB -
  KQ252_RS08400 (KQ252_08385) - 1745264..1745905 (-) 642 WP_001093907.1 phospholipid-binding protein MlaC -
  KQ252_RS08405 (KQ252_08390) - 1745932..1746612 (-) 681 WP_000842362.1 outer membrane lipid asymmetry maintenance protein MlaD -

Sequence

Protein


Download         Length: 681 a.a.        Molecular weight: 76407.99 Da        Isoelectric Point: 7.7343

>NTDB_id=504756 KQ252_RS08370 WP_002068928.1 1740051..1742096(+) (recG) [Acinetobacter baumannii strain UC25604]
MTSVHQLQGVGSASAALLEKLNIFTTDDLLFHLPRDYEDRSTIIPMNQLVVGRSYLLEGEVKSVDFPPGKRKSMAALIQD
EFGKVTLRFYHIYKNLTDKIKPGNRLRIFGEVRVGARGLELYHPEIQLINEHTPLPKTQLTAIYPSTDGLTQAKLREYVK
QALKHHSDALPELLPKQYTNGYALKEALHYIHEPPVDANMIQLAQGSHPAQQRLIFEELVAHQISLLTRRAYIRQIASPA
FPSSKVLAKKLLEALPFQMTNAQKRVSKEILSDLKQHQPMLRLVQGDVGAGKTLVAAIAACHALEADWQVALMAPTEILA
EQHYLNFKRWFEPLGITVAWLSGKQKGKARAHAEQQIKEGHAELIVGTHALFQDNVDFAKLGLVIIDEQHRFGVDQRLAL
RNKGAEQLTPHQLVMTATPIPRTLAMSAYGDLDTSIIDELPPGRTPIQTVTIPLDRREEVLHRIASNCREGKQAYWVCTL
VEQSETLDAQAAEATYQEMKERFPELNIGLVHGKMKADEKQAVMQAFKNNELQLLIATTVIEVGVDVPNASIMVIENAER
LGLSQLHQLRGRVGRGAKASFCVLLYKPPLSQNGQERLSILRESNDGFVIAEKDLELRGPGELLGTKQTGDMGFRVARLE
RDDHLLSQAHYVAQQVLKDYPEQADALLKRWLPEAPRYAYV

Nucleotide


Download         Length: 2046 bp        

>NTDB_id=504756 KQ252_RS08370 WP_002068928.1 1740051..1742096(+) (recG) [Acinetobacter baumannii strain UC25604]
ATGACTTCAGTCCATCAGTTACAAGGCGTTGGATCGGCTTCAGCAGCCCTACTCGAAAAACTAAATATTTTTACCACAGA
TGATTTGCTGTTTCATCTGCCCCGTGATTATGAAGATCGCAGTACCATTATTCCTATGAATCAATTGGTGGTTGGTCGTA
GTTATTTACTCGAGGGTGAAGTCAAATCTGTTGATTTCCCTCCAGGTAAACGTAAATCTATGGCCGCATTAATACAAGAT
GAATTTGGTAAGGTGACTTTACGCTTTTATCATATTTATAAAAATTTAACCGACAAAATAAAACCTGGTAACCGTTTACG
TATTTTTGGTGAAGTTCGCGTAGGTGCACGAGGGCTTGAGCTTTATCATCCAGAAATTCAACTTATTAATGAACATACAC
CACTACCAAAAACGCAGCTCACTGCAATTTATCCAAGTACCGATGGCCTAACACAAGCTAAATTACGCGAATATGTTAAA
CAAGCGTTGAAGCATCATAGTGATGCCTTACCCGAGTTACTCCCTAAACAATATACAAATGGGTATGCACTCAAAGAAGC
TTTACATTACATTCACGAGCCGCCAGTTGATGCCAATATGATCCAACTGGCTCAAGGCTCTCATCCTGCGCAGCAACGTC
TTATTTTTGAAGAGCTGGTCGCACATCAAATTAGTCTTCTCACTCGACGTGCTTATATTCGCCAAATTGCTTCTCCTGCT
TTTCCGAGTAGTAAAGTGCTTGCAAAAAAACTGCTAGAAGCTTTACCTTTTCAAATGACCAATGCGCAAAAACGTGTATC
AAAAGAAATTTTAAGCGACTTAAAACAACATCAACCTATGCTGCGTTTGGTACAAGGTGATGTAGGGGCTGGAAAAACTT
TAGTTGCAGCGATTGCAGCATGTCATGCATTGGAAGCAGATTGGCAAGTTGCGTTAATGGCACCCACCGAAATTTTAGCA
GAGCAGCATTATTTAAATTTTAAACGCTGGTTTGAACCTTTAGGTATTACGGTAGCTTGGTTGTCGGGTAAACAAAAAGG
AAAAGCGCGGGCACACGCTGAGCAACAAATTAAAGAAGGCCATGCTGAACTGATTGTGGGTACTCATGCCTTATTTCAAG
ATAACGTTGATTTTGCAAAACTAGGACTCGTGATTATTGATGAACAGCACCGATTCGGGGTCGATCAACGATTAGCCTTA
CGCAATAAAGGCGCCGAACAGCTCACCCCACATCAACTGGTCATGACTGCAACGCCAATTCCTAGAACACTGGCAATGAG
TGCTTATGGCGATTTAGATACATCAATTATTGATGAATTACCGCCAGGCCGAACTCCAATTCAGACCGTCACGATTCCGC
TAGATCGTCGTGAAGAAGTACTGCATCGAATTGCTTCAAACTGCCGAGAAGGCAAACAGGCCTACTGGGTATGTACTCTG
GTCGAACAGTCCGAAACTTTAGATGCTCAAGCCGCCGAAGCCACCTATCAAGAAATGAAAGAGCGCTTTCCTGAACTTAA
TATTGGTTTGGTTCATGGCAAAATGAAAGCCGATGAAAAACAGGCTGTCATGCAAGCATTTAAAAACAATGAACTACAAC
TGCTAATTGCCACAACTGTTATTGAGGTTGGAGTAGATGTACCCAATGCGTCAATTATGGTCATTGAGAATGCTGAACGA
TTAGGGCTTTCACAGCTACACCAATTACGAGGGCGTGTAGGACGAGGTGCAAAAGCCAGTTTTTGTGTTCTTCTCTATAA
ACCACCACTTTCACAAAATGGGCAAGAAAGACTTTCAATTTTAAGAGAAAGTAATGATGGCTTTGTTATTGCTGAAAAAG
ATCTTGAGCTAAGAGGCCCGGGTGAGTTATTAGGAACAAAACAAACAGGTGATATGGGTTTCCGTGTCGCACGTTTAGAG
CGAGATGATCATTTATTGAGTCAAGCACACTACGTTGCACAACAAGTTCTAAAAGATTACCCTGAGCAAGCTGATGCCTT
ATTGAAGCGCTGGCTTCCCGAAGCTCCTCGATATGCATATGTTTAA

Domains

Predicted by InterProScan.

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(605-663)

DEAD/DEAH box helicase (DEAD)

(261-422)

Helicase conserved C-terminal domain (Helicase_C)

(466-576)

RecG wedge domain (RecG_wedge)

(7-163)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Neisseria meningitidis strain C311

49.925

98.238

0.49
  recG/mmsA Streptococcus pneumoniae R6

41.353

97.651

0.404
  recG/mmsA Streptococcus pneumoniae R36A

41.353

97.651

0.404
  recG Bacillus subtilis subsp. subtilis str. 168

38.574

100

0.389