Detailed information NTG0504703

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: IWH25_RS07715
• Genome accession: NZ_CP064781
• Coordinates: 1563172..1564518 (+)
• Length: 448 a.a.
• NCBI ID: WP_203388733.1
• Uniprot ID: A0A974Y5A3
• Organism: Azospira restricta strain DSM 18626
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 1558172..1569518

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IWH25_RS07690 (IWH25_07685)	-	1559237..1559902 (-)	666	WP_203388729.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	-
IWH25_RS07695 (IWH25_07690)	ispB	1560195..1561163 (+)	969	WP_203388730.1	octaprenyl diphosphate synthase	-
IWH25_RS07705 (IWH25_07700)	-	1561350..1561586 (+)	237	WP_203388731.1	PP0621 family protein	-
IWH25_RS07710 (IWH25_07705)	-	1561590..1563185 (+)	1596	WP_203388732.1	two-component system sensor histidine kinase NtrB	-
IWH25_RS07715 (IWH25_07710)	pilR	1563172..1564518 (+)	1347	WP_203388733.1	sigma-54-dependent transcriptional regulator	Regulator
IWH25_RS07720 (IWH25_07715)	ampD	1564520..1565077 (+)	558	WP_203388734.1	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	-
IWH25_RS07725 (IWH25_07720)	-	1565671..1566567 (+)	897	WP_203388735.1	histone H1-like repetitive region-containing protein	-
IWH25_RS07730 (IWH25_07725)	-	1566688..1567845 (-)	1158	WP_203388736.1	pyridoxal phosphate-dependent aminotransferase	-

Sequence

Protein

• Length: 448 a.a.
• Molecular weight: 48503.29 Da
• Isoelectric Point: 4.7896

>NTDB_id=504703 IWH25_RS07715 WP_203388733.1 1563172..1564518(+) (pilR) [Azospira restricta strain DSM 18626]
MSVNRNERRVRGDLSRVLVVDDEADIRELLDLTLSRMGLAADCAGSVAEARQCLERERYQLCLTDMRLPDGEGLEVVRLV
AERSPETPVAVITAFGSTENAVAALKAGAFDYLAKPVALDQLRTLVKSALNLPAAAAGKAEQQLIGESAAIAQVRELIDK
LARSQAPVYISGESGSGKELAARLIHSRSTRAQGAFVPVNCGAIPETLVESEFFGYRKGAFTGADADREGFFQAADGGTL
FLDEVADLPLAMQVKLLRAIQEKRVRKVGSTVEEPVDVRLISATHRNLRECVEAGVFRQDLYYRLNVIELRMPPLRERQE
DIPELVQAILARIAGAGVSVSEGALQALCGYVFPGNVRELENILERATALSAGSEIDVVDLQLAPEEGEGVPASRVGETL
DDTLNRVERAAILDALAKTGGNRTAAARLLGVTFRSLRYRIERLGIDE

Nucleotide

• Length: 1347 bp

>NTDB_id=504703 IWH25_RS07715 WP_203388733.1 1563172..1564518(+) (pilR) [Azospira restricta strain DSM 18626]
GTGAGTGTCAATAGGAACGAACGGCGCGTGCGCGGGGATCTGTCGCGGGTACTGGTGGTCGACGACGAGGCCGACATCCG
CGAACTGCTCGACCTGACGCTGTCGCGCATGGGGCTGGCGGCCGACTGCGCGGGCTCGGTCGCCGAGGCGCGCCAGTGCC
TGGAACGCGAACGCTACCAGCTGTGCCTGACCGACATGCGCCTGCCGGACGGCGAGGGGCTGGAGGTCGTGCGGCTGGTC
GCCGAGCGCTCGCCGGAGACGCCGGTGGCCGTGATCACCGCCTTCGGCAGCACCGAGAATGCCGTGGCCGCACTCAAGGC
CGGCGCCTTCGACTATCTGGCGAAACCGGTCGCACTCGACCAGCTGCGCACGCTGGTGAAATCGGCGCTCAATCTGCCGG
CGGCCGCCGCCGGCAAGGCGGAGCAGCAGCTGATCGGGGAGTCCGCGGCGATCGCGCAGGTGCGCGAGCTGATCGACAAG
CTGGCGCGCAGCCAGGCGCCGGTCTACATCTCCGGCGAGTCGGGCAGCGGCAAGGAACTTGCCGCGCGCCTGATCCATTC
CCGCAGCACGCGGGCGCAGGGCGCCTTCGTGCCGGTGAACTGCGGCGCAATTCCCGAGACCCTGGTCGAGAGCGAGTTCT
TCGGCTACCGCAAGGGCGCCTTCACCGGCGCCGATGCCGACCGCGAGGGCTTCTTCCAGGCGGCCGACGGCGGTACGCTG
TTCCTCGACGAGGTGGCCGACCTGCCGCTGGCGATGCAGGTGAAGCTGTTGCGCGCGATCCAGGAGAAGCGGGTGCGCAA
GGTCGGCAGCACGGTCGAGGAGCCGGTCGACGTGCGCCTCATTTCCGCGACGCACCGCAACCTGCGCGAATGCGTCGAGG
CCGGTGTCTTCCGCCAGGATCTCTACTACCGGCTCAACGTCATCGAGCTGCGCATGCCGCCGCTGCGCGAGCGCCAGGAA
GACATTCCCGAGCTGGTGCAGGCGATCCTCGCGCGTATCGCCGGTGCCGGCGTCTCGGTCAGCGAGGGGGCGCTGCAGGC
GCTGTGCGGCTACGTCTTCCCGGGCAACGTGCGCGAACTGGAGAACATCCTCGAGCGCGCGACCGCACTCTCGGCGGGGA
GCGAGATCGACGTCGTCGACCTGCAGCTGGCACCGGAAGAGGGTGAGGGCGTGCCGGCGTCGCGCGTCGGCGAGACCCTC
GACGACACGCTCAACCGGGTCGAGCGGGCGGCGATTCTCGACGCACTGGCGAAGACCGGCGGCAACCGCACCGCGGCGGC
GCGGCTGCTCGGCGTCACCTTCCGCTCGCTGCGCTATCGCATCGAGCGCCTCGGCATCGACGAATGA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (404-443)

• Response regulator receiver domain (Response_reg) (17-126)

• Sigma-54 interaction domain (Sigma54_activat) (144-310)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	59.05	98.661	0.583
pilR	Acinetobacter baumannii strain A118	45.752	100	0.469
luxO	Vibrio cholerae strain A1552	37.528	99.33	0.373