Detailed information NTG0050431

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HPB14_RS01645
• Genome accession: NC_017733
• Coordinates: 334012..334812 (+)
• Length: 266 a.a.
• NCBI ID: WP_000835216.1
• Uniprot ID: -
• Organism: Helicobacter pylori HUP-B14
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 329012..339812

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPB14_RS01610 (HPB14_01610)	pseH	329507..330049 (+)	543	WP_000742664.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
HPB14_RS01615 (HPB14_01615)	-	329982..330920 (-)	939	WP_000833853.1	tetraacyldisaccharide 4'-kinase	-
HPB14_RS01620 (HPB14_01620)	-	330917..331699 (-)	783	WP_001168290.1	NAD+ synthase	-
HPB14_RS01630 (HPB14_01625)	ilvC	331948..332940 (+)	993	WP_001207746.1	ketol-acid reductoisomerase	-
HPB14_RS01635 (HPB14_01630)	minD	332964..333770 (+)	807	WP_001019049.1	septum site-determining protein MinD	-
HPB14_RS01640 (HPB14_01635)	minE	333767..334000 (+)	234	WP_000051414.1	cell division topological specificity factor MinE	-
HPB14_RS01645 (HPB14_01640)	dprA	334012..334812 (+)	801	WP_000835216.1	DNA-processing protein DprA	Machinery gene
HPB14_RS01650 (HPB14_01645)	dprB	334809..335213 (+)	405	WP_000599212.1	Holliday junction resolvase RuvX	Machinery gene
HPB14_RS01655 (HPB14_01650)	-	335346..336017 (+)	672	WP_041199468.1	cysteine-rich Sel1 repeat protein	-
HPB14_RS01660 (HPB14_01655)	-	336132..336470 (+)	339	WP_000699906.1	hypothetical protein	-
HPB14_RS01665 (HPB14_01660)	-	336454..337014 (+)	561	WP_000038897.1	hypothetical protein	-
HPB14_RS01670 (HPB14_01665)	-	337160..338041 (-)	882	WP_001117143.1	RluA family pseudouridine synthase	-
HPB14_RS01675 (HPB14_01670)	recJ	338041..339591 (-)	1551	WP_000810698.1	single-stranded-DNA-specific exonuclease RecJ	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29865.76 Da
• Isoelectric Point: 8.2264

>NTDB_id=50431 HPB14_RS01645 WP_000835216.1 334012..334812(+) (dprA) [Helicobacter pylori HUP-B14]
MKSHFQYSALENIPKAFDILKDPPKKLYCVGDTKLLEAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHKVIQEIAQNGLILSEYEKDFMPIKGSFLARNRLVIALSDAVIIPQADLQSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDYHLKEMPEMKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=50431 HPB14_RS01645 WP_000835216.1 334012..334812(+) (dprA) [Helicobacter pylori HUP-B14]
ATGAAAAGCCATTTCCAATACAGCGCGCTAGAAAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCTCCTAAAAAACT
CTATTGTGTGGGCGATACCAAGCTTTTAGAAGCGCCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTACA
GCAAGCAACACACCATCACTCTAGCTAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGGGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCCTACCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTCATCTATCCTACGAA
CAATCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAAGACTTCATGCCCATTAAAG
GCTCTTTTTTAGCGAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTGATTATCCCTCAAGCGGATTTACAAAGCGGC
TCTATGAGCAGCGCGAGATTAGCCCAGAAATACCAAAAACCCTTATTTGTTTTACCCCAACGCTTGAATGAAAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACT
ACCATTTAAAAGAAATGCCTGAAATGAAAGATGAATTTTTAGAATATTGTGCGAAAAACCCTAGCTATGAAGAAGCGTAT
CTCAAATTTGGGGATAAGCTTTTAGAATACGAGCTGTTAGGTAAGATCAAGCGCATCAATCACATTGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	97.744	100	0.977
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.23	84.962	0.41