Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   SCRE_RS05705 Genome accession   NC_022236
Coordinates   1145842..1146846 (-) Length   334 a.a.
NCBI ID   WP_003068684.1    Uniprot ID   U2XVW3
Organism   Streptococcus constellatus subsp. pharyngis C232     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1140842..1151846
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SCRE_RS05685 (SCRE_1119) yycF 1142076..1142777 (-) 702 WP_003035055.1 response regulator YycF -
  SCRE_RS05690 (SCRE_1120) - 1143078..1143410 (-) 333 WP_006268722.1 hypothetical protein -
  SCRE_RS05695 (SCRE_1121) - 1143437..1144750 (-) 1314 WP_006268747.1 glycosyltransferase family 4 protein -
  SCRE_RS05700 (SCRE_1122) - 1144752..1145750 (-) 999 WP_020997876.1 glycosyltransferase family 4 protein -
  SCRE_RS05705 (SCRE_1123) ccpA 1145842..1146846 (-) 1005 WP_003068684.1 catabolite control protein A Regulator
  SCRE_RS05710 (SCRE_1124) - 1147111..1148193 (+) 1083 WP_020997877.1 M24 family metallopeptidase -
  SCRE_RS05715 (SCRE_1125) - 1148716..1149297 (-) 582 WP_006268725.1 class I SAM-dependent methyltransferase -
  SCRE_RS05720 (SCRE_1126) galE 1149616..1150635 (-) 1020 WP_020997878.1 UDP-glucose 4-epimerase GalE -
  SCRE_RS05725 (SCRE_1127) rfbB 1150670..1151716 (-) 1047 WP_020997879.1 dTDP-glucose 4,6-dehydratase -

Sequence


Protein


Download         Length: 334 a.a.        Molecular weight: 37056.22 Da        Isoelectric Point: 6.1741

>NTDB_id=50417 SCRE_RS05705 WP_003068684.1 1145842..1146846(-) (ccpA) [Streptococcus constellatus subsp. pharyngis C232]
MNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNITSSYFA
TLAKGIDDIAEMYKYNIVLANSDEDDDKEVSVVNTLFSKQVDGIIFMGYHLTEKIRSEFSRSRTPVVLAGTVDVEHQLPS
VNIDYKQATMDAVERLTKNNKKIAFVSGPLVDDINGKIRLIGYKEALKKAKLSYSEGLVFESKYSYEDGYQLAERVIASK
ATAAFVTGDELAAGLLNGLSDKGVNIPEDFEIITSDDSQVARFTRPNLTTIGQPLYDLGAISMRMLTKIMHKEELEEREV
VLAHGLIERRSTRK

Nucleotide


Download         Length: 1005 bp        

>NTDB_id=50417 SCRE_RS05705 WP_003068684.1 1145842..1146846(-) (ccpA) [Streptococcus constellatus subsp. pharyngis C232]
ATGAACACAGACGATACTGTAACGATTTATGATGTCGCCCGTGAAGCGGGAGTTTCAATGGCGACCGTTAGCCGTGTCGT
AAACGGCAATAAAAATGTAAAGGAAAATACAAGAAAAAAAGTCTTGGAAGTCATTGATCGCCTTGACTATCGACCAAATG
CAGTTGCTCGTGGACTTGCCAGTAAGAAAACGACAACAGTAGGAGTTGTCATTCCAAACATTACAAGCAGTTATTTTGCA
ACGCTTGCGAAAGGAATTGATGACATCGCAGAGATGTATAAGTATAATATTGTTTTGGCAAATAGTGATGAGGATGATGA
CAAGGAAGTTTCTGTTGTCAATACCTTGTTCTCAAAACAAGTGGACGGCATTATCTTTATGGGATATCATCTAACAGAAA
AGATTCGTTCTGAGTTTTCTCGTTCAAGGACGCCGGTTGTACTTGCAGGAACGGTTGACGTGGAACATCAATTGCCAAGT
GTTAATATTGATTACAAACAAGCAACTATGGATGCAGTAGAGCGCCTCACTAAAAACAATAAAAAAATTGCTTTTGTGAG
TGGACCTTTGGTAGATGATATAAATGGTAAGATTCGTTTAATTGGTTACAAAGAAGCGTTGAAAAAAGCAAAACTTTCTT
ATAGTGAAGGGCTTGTCTTTGAGTCTAAATACAGCTATGAGGATGGCTATCAATTGGCAGAGCGTGTCATTGCTTCTAAA
GCGACAGCAGCCTTTGTGACTGGTGATGAACTGGCAGCTGGATTGTTAAATGGCTTATCAGACAAAGGTGTAAATATACC
AGAAGATTTTGAAATCATTACTAGTGATGATTCGCAGGTAGCACGTTTTACTCGTCCAAATTTGACGACAATTGGACAAC
CTTTGTACGATCTTGGTGCGATTAGTATGCGCATGTTGACTAAGATTATGCACAAGGAAGAGTTGGAAGAACGTGAAGTG
GTGTTAGCTCATGGTCTTATTGAGCGCCGTTCAACAAGGAAGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB U2XVW3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

90.719

100

0.907

  ccpA Streptococcus pneumoniae D39

87.725

100

0.877

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

58.308

99.102

0.578


Multiple sequence alignment