Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Machinery gene
Locus tag   S70_RS11360 Genome accession   NC_017731
Coordinates   2479136..2480662 (-) Length   508 a.a.
NCBI ID   WP_004915428.1    Uniprot ID   A0A140NMR7
Organism   Providencia stuartii MRSN 2154     
Function   ssDNA binding (predicted from homology)   
DNA processing

Genomic Context

Location: 2474136..2485662
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  S70_RS20715 - 2476622..2477415 (-) 794 Protein_2237 transposase -
  S70_RS11350 (S70_11560) hdfR 2477656..2478501 (-) 846 WP_004915423.1 HTH-type transcriptional regulator HdfR -
  S70_RS11355 (S70_11565) - 2478613..2478951 (+) 339 WP_004915426.1 DUF413 domain-containing protein -
  S70_RS11360 (S70_11570) comM 2479136..2480662 (-) 1527 WP_004915428.1 YifB family Mg chelatase-like AAA ATPase Machinery gene
  S70_RS21090 ilvL 2481142..2481243 (+) 102 WP_071599630.1 ilv operon leader peptide -
  S70_RS11365 (S70_11580) ilvG 2481376..2483022 (+) 1647 WP_004915430.1 acetolactate synthase 2 catalytic subunit -
  S70_RS11370 (S70_11585) ilvM 2483019..2483288 (+) 270 WP_004915433.1 acetolactate synthase 2 small subunit -
  S70_RS11375 (S70_11590) - 2483301..2484227 (+) 927 WP_004915437.1 branched-chain amino acid transaminase -

Sequence

Protein


Download         Length: 508 a.a.        Molecular weight: 55554.29 Da        Isoelectric Point: 8.7576

>NTDB_id=50417 S70_RS11360 WP_004915428.1 2479136..2480662(-) (comM) [Providencia stuartii MRSN 2154]
MALAIVYTRASIGMNAPLVTVEAHISNGLPGLTLVGLPETAVKESRDRVRSALLNSGFEFPAKKMTINLAPADLPKEGGR
YDLAIAIAILASSGQVPTKILHQYEFLGELALSGHIRHVNGAIPAALAALTQKRQLVLSSENQYELNLLPDNSVKFAGTL
LELCHFLYEKMTLSGNFHPTEIPEPPICDGNISDIIGQEQGKRALEICASGGHNLLLLGPPGTGKTMLASRLKTLLPSLT
PQEALEVASIHSLCHSSDLTSPWPPRPFRAPHHSASMAALIGGGSLPKPGEISLAHNGILFLDELPEFSRSVLDALREPL
ESRQVIISRAKAKVCFPANFQLIAALNPSPTGQYQGDYCRSSSTKILRYLSRVSGPFLDRFDLSIEIPLLPLGTLSHQQY
QSENSEQIRARVILAREIQMKRMGKLNSQLTARETTNLCQLTSKDSLFLEHALNKLGLSIRAWHRILRVARTIADLQNTN
NIEKPHLLEALGYRAMDKLLLHLQKQVS

Nucleotide


Download         Length: 1527 bp        

>NTDB_id=50417 S70_RS11360 WP_004915428.1 2479136..2480662(-) (comM) [Providencia stuartii MRSN 2154]
ATGGCATTAGCAATTGTGTATACAAGAGCATCGATAGGAATGAATGCGCCACTGGTTACTGTTGAAGCACATATTAGTAA
TGGGCTACCTGGATTGACACTTGTAGGTTTACCTGAAACGGCTGTAAAAGAATCGAGAGATAGAGTACGGAGCGCATTAT
TAAACAGCGGTTTTGAATTCCCTGCAAAAAAAATGACGATTAACTTAGCCCCTGCCGATCTCCCGAAAGAAGGGGGACGT
TACGATCTTGCGATAGCAATCGCTATCTTAGCGTCATCAGGCCAAGTGCCTACAAAAATACTTCATCAGTATGAATTTCT
CGGTGAACTCGCTTTGTCTGGTCATATTCGCCATGTAAATGGTGCTATCCCTGCCGCACTCGCGGCATTAACACAAAAAA
GGCAACTCGTTCTTTCATCTGAAAATCAATATGAGCTGAATTTATTACCTGATAATAGTGTTAAGTTTGCAGGAACATTA
TTAGAACTTTGTCATTTTTTATACGAGAAAATGACATTATCAGGTAATTTCCATCCGACCGAAATCCCTGAGCCCCCCAT
TTGCGACGGGAATATTAGCGATATTATTGGCCAAGAGCAGGGAAAAAGAGCGTTAGAGATCTGTGCAAGTGGTGGGCACA
ACTTATTGTTATTAGGCCCTCCAGGCACAGGAAAAACGATGCTAGCAAGTCGCCTAAAAACATTACTACCGTCCCTAACG
CCACAGGAAGCCCTAGAAGTCGCCTCTATACATAGCCTATGCCATTCAAGCGATTTAACTTCTCCTTGGCCTCCTAGACC
CTTTAGAGCTCCTCACCATAGCGCGTCAATGGCAGCACTCATTGGTGGAGGGAGCCTTCCTAAACCCGGTGAAATATCAT
TAGCCCATAATGGCATTTTATTTCTGGATGAATTGCCTGAGTTTAGCCGCTCTGTACTTGACGCATTACGTGAGCCACTT
GAATCAAGGCAAGTTATTATTTCCCGCGCTAAAGCAAAAGTGTGTTTCCCAGCCAACTTTCAACTCATCGCCGCACTGAA
CCCAAGCCCTACAGGCCAATATCAAGGTGATTACTGCCGAAGCTCCTCCACGAAAATCTTACGCTACTTATCACGCGTTT
CAGGTCCTTTTCTTGATCGATTTGATCTGTCTATTGAAATACCGCTGCTTCCGTTGGGTACACTCAGTCATCAACAGTAT
CAAAGCGAAAATAGTGAGCAAATCCGCGCTAGAGTCATACTTGCAAGAGAGATACAAATGAAAAGAATGGGGAAACTCAA
TAGCCAATTAACCGCCAGAGAAACGACAAACCTATGCCAACTTACATCCAAAGATTCACTTTTTTTGGAGCATGCCTTAA
ACAAACTTGGGTTATCGATACGTGCTTGGCATCGCATTTTGAGAGTCGCTCGAACTATTGCCGACTTACAAAATACCAAT
AATATCGAAAAACCCCATCTTCTCGAAGCTCTCGGTTATAGAGCGATGGATAAGTTATTGCTTCATTTGCAAAAACAAGT
AAGCTGA

Domains

Predicted by InterproScan.

Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C)

(403-494)

Subunit ChlI of Mg-chelatase (ChlI)

(21-142)

Magnesium chelatase, subunit ChlI (Mg_chelatase)

(192-390)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A140NMR7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Vibrio cholerae strain A1552

60.672

99.606

0.604
  comM Glaesserella parasuis strain SC1401

60.314

100

0.604
  comM Haemophilus influenzae Rd KW20

59.883

100

0.602
  comM Vibrio campbellii strain DS40M4

59.055

100

0.591
  comM Legionella pneumophila str. Paris

48.104

98.622

0.474
  comM Legionella pneumophila strain ERS1305867

48.104

98.622

0.474
  RA0C_RS07335 Riemerella anatipestifer ATCC 11845 = DSM 15868

44.902

100

0.451

Multiple sequence alignment