Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG/mmsA   Type   Machinery gene
Locus tag   KRG72_RS07720 Genome accession   NZ_CP076703
Coordinates   1548581..1550596 (-) Length   671 a.a.
NCBI ID   WP_258250406.1    Uniprot ID   -
Organism   Streptococcus equinus strain S1     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1543581..1555596
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KRG72_RS07690 (KRG72_07700) - 1543850..1545253 (-) 1404 WP_258250403.1 Cof-type HAD-IIB family hydrolase -
  KRG72_RS07695 (KRG72_07705) - 1545324..1546286 (+) 963 WP_006532010.1 asparaginase -
  KRG72_RS07700 (KRG72_07710) - 1546335..1546544 (-) 210 WP_014335241.1 helix-turn-helix transcriptional regulator -
  KRG72_RS07705 (KRG72_07715) - 1546555..1547058 (-) 504 WP_258250404.1 DUF2975 domain-containing protein -
  KRG72_RS07710 (KRG72_07720) - 1547086..1547553 (-) 468 WP_258250405.1 hypothetical protein -
  KRG72_RS07715 (KRG72_07725) - 1547610..1548077 (-) 468 WP_074564359.1 hypothetical protein -
  KRG72_RS07720 (KRG72_07730) recG/mmsA 1548581..1550596 (-) 2016 WP_258250406.1 ATP-dependent DNA helicase RecG Machinery gene
  KRG72_RS07725 (KRG72_07735) alr 1550682..1551788 (-) 1107 WP_258250407.1 alanine racemase -
  KRG72_RS07730 (KRG72_07740) acpS 1551857..1552216 (-) 360 WP_258250408.1 holo-ACP synthase -
  KRG72_RS07735 (KRG72_07745) - 1552338..1553393 (-) 1056 WP_258250409.1 3-deoxy-7-phosphoheptulonate synthase -
  KRG72_RS07740 (KRG72_07750) - 1553397..1554428 (-) 1032 WP_258250410.1 3-deoxy-7-phosphoheptulonate synthase -

Sequence

Protein


Download         Length: 671 a.a.        Molecular weight: 74826.96 Da        Isoelectric Point: 6.2648

>NTDB_id=504087 KRG72_RS07720 WP_258250406.1 1548581..1550596(-) (recG/mmsA) [Streptococcus equinus strain S1]
MNLQSSIEELKGLGPKSAEKFHKLDIYTIEDLLLYYPFRYEDFKSKSVLDLVDGEKAVIVGTVVTPANVQYYGYKRNRLS
FKIKQGEAVIAVSFFNQPYLADKVELGSDVAIFGKWDAQKSAVTGMKILAQVEDDMQPVYRVAQGISQNALIKAIKAAFA
LGAQNWLPENLPQVFLDKYRLLGRAKATEAMHFPKDLAEYKQALRRIKFEELFYFQMNLQALKADNKSEANGLMIAYDEQ
KVADKIASLPFDLTGGQKHSLSDILSDMRSGGHMNRLLQGDVGSGKTVVASLAMYAAYTAGYQSALMVPTEILAEQHFDS
LTQLFPDLSIAILTSGMKAANKKAALAAIADGSVDMIVGTHALIQDAVSYHRLGLVITDEQHRFGVNQRRIFREKGENPD
VLMMTATPIPRTLAITAFGEMDVSIIDELPAGRKPIITRWVKHEQLDVVLDWVKKELQKGAQAYVISPLIEESESLDLKN
ALALHEDLSEYFADCANVALMHGRMKNEEKEAIMQDFKAQKSQVLVSTTVIEVGVNVPNATIMIIMDADRFGLSQLHQLR
GRVGRGDKQSYAILVANPKTETGKKRMKIMTETTDGFVLAEADLKMRGSGEIFGTRQSGIPEFQVADIVEDYNILEEARR
VASQIVSNPNWRQEPQWQIITQNLKDKGNFD

Nucleotide


Download         Length: 2016 bp        

>NTDB_id=504087 KRG72_RS07720 WP_258250406.1 1548581..1550596(-) (recG/mmsA) [Streptococcus equinus strain S1]
ATGAATTTACAATCATCAATTGAGGAATTAAAAGGCTTAGGTCCTAAGTCGGCAGAAAAATTCCATAAATTAGACATTTA
TACGATTGAGGATTTGCTGCTTTATTATCCTTTTCGTTATGAAGATTTTAAGAGCAAGAGTGTTTTAGATTTAGTTGACG
GGGAAAAAGCTGTTATTGTCGGAACAGTGGTAACGCCAGCAAATGTCCAATATTATGGCTATAAGCGTAATCGCCTGTCT
TTTAAAATCAAACAAGGCGAAGCCGTTATCGCGGTGTCTTTTTTCAATCAGCCTTATTTGGCGGATAAAGTGGAACTTGG
CAGTGATGTAGCCATTTTCGGAAAATGGGACGCTCAAAAATCAGCAGTGACTGGTATGAAGATTTTAGCGCAGGTCGAAG
ATGATATGCAGCCTGTTTACCGTGTGGCGCAGGGCATTTCGCAAAATGCTTTGATTAAAGCTATAAAAGCCGCTTTTGCT
CTAGGTGCACAAAATTGGTTGCCTGAGAATCTACCCCAAGTTTTCTTGGATAAATACCGTTTATTAGGTCGTGCAAAAGC
AACAGAAGCCATGCATTTTCCAAAGGATTTAGCAGAATACAAACAAGCCCTTCGTCGTATAAAGTTTGAAGAACTTTTTT
ATTTTCAAATGAATCTGCAAGCTTTGAAGGCGGATAATAAATCAGAAGCTAACGGTCTTATGATTGCATACGATGAGCAA
AAAGTGGCTGATAAGATAGCGAGTCTCCCTTTTGATTTGACGGGTGGGCAAAAGCACAGCCTTAGTGATATTTTGTCTGA
TATGCGCTCTGGTGGACATATGAACCGTCTTTTGCAAGGGGACGTTGGTTCTGGTAAAACAGTGGTTGCAAGTCTTGCTA
TGTATGCGGCTTATACGGCAGGTTATCAGTCAGCCTTGATGGTGCCAACAGAAATCTTGGCTGAACAACATTTTGATAGT
TTAACGCAGCTGTTTCCTGATTTATCCATTGCTATTTTGACATCAGGTATGAAGGCAGCTAATAAAAAAGCTGCTCTTGC
TGCGATTGCGGATGGTTCTGTGGACATGATTGTGGGAACGCATGCGCTGATTCAAGATGCGGTGAGCTACCATCGTCTTG
GACTTGTTATTACAGATGAGCAGCACCGTTTTGGGGTTAATCAACGTCGTATTTTCCGCGAAAAAGGCGAAAATCCTGAT
GTGCTCATGATGACAGCGACGCCTATTCCACGTACGCTTGCCATTACTGCTTTTGGTGAAATGGATGTTTCCATTATTGA
TGAATTGCCTGCAGGGCGAAAACCAATTATTACACGCTGGGTCAAGCATGAGCAGTTGGATGTTGTCCTTGACTGGGTCA
AAAAAGAATTGCAAAAAGGTGCGCAAGCTTACGTCATTTCACCTTTGATTGAGGAGTCTGAATCTCTTGATCTGAAAAAT
GCGCTTGCTTTGCATGAAGATTTGTCTGAGTATTTTGCGGATTGTGCCAATGTTGCCTTGATGCACGGACGCATGAAAAA
TGAAGAAAAAGAAGCTATCATGCAAGACTTTAAAGCTCAAAAGAGTCAAGTTCTGGTTTCAACGACAGTGATTGAAGTTG
GGGTCAATGTGCCAAATGCAACTATTATGATTATCATGGATGCTGATCGTTTTGGTCTGAGTCAGCTGCATCAGCTGCGC
GGACGTGTTGGGCGTGGTGATAAGCAATCTTATGCGATTTTGGTTGCTAATCCAAAGACTGAGACAGGAAAAAAACGCAT
GAAAATCATGACAGAAACCACAGATGGTTTTGTACTGGCTGAAGCTGACCTTAAAATGCGTGGCTCTGGTGAAATTTTCG
GAACACGTCAATCGGGGATTCCAGAATTTCAAGTGGCGGATATTGTGGAAGACTATAATATTTTAGAAGAAGCTAGACGA
GTTGCCAGCCAGATTGTTTCAAATCCAAATTGGCGCCAAGAACCACAATGGCAAATCATCACTCAAAATCTCAAAGATAA
AGGTAACTTTGATTAA

Domains

Predicted by InterProScan.

RecG wedge domain (RecG_wedge)

(10-157)

Helicase conserved C-terminal domain (Helicase_C)

(453-566)

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(593-666)

DEAD/DEAH box helicase (DEAD)

(257-411)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG/mmsA Streptococcus pneumoniae R6

70.79

100

0.708
  recG/mmsA Streptococcus pneumoniae R36A

70.79

100

0.708
  recG Bacillus subtilis subsp. subtilis str. 168

50.074

100

0.502
  recG Neisseria meningitidis strain C311

39.542

97.615

0.386