Detailed information NTG0502535

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: KMZ16_RS14100
• Genome accession: NZ_CP076445
• Coordinates: 2703937..2704542 (-)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis subsp. subtilis strain ps4100
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2698937..2709542

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KMZ16_RS14070 (KMZ16_13945)	-	2699750..2700139 (+)	390	WP_029727131.1	TIGR04086 family membrane protein	-
KMZ16_RS14075 (KMZ16_13950)	yajC	2700196..2700462 (-)	267	WP_004398708.1	preprotein translocase subunit YajC	-
KMZ16_RS14080 (KMZ16_13955)	tgt	2700499..2701644 (-)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
KMZ16_RS14085 (KMZ16_13960)	queA	2701671..2702699 (-)	1029	WP_003229723.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
KMZ16_RS14090 (KMZ16_13965)	yrzS	2702729..2702929 (-)	201	WP_003222669.1	DUF2905 domain-containing protein	-
KMZ16_RS14095 (KMZ16_13970)	ruvB	2702922..2703926 (-)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
KMZ16_RS14100 (KMZ16_13975)	ruvA	2703937..2704542 (-)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
KMZ16_RS14105 (KMZ16_13980)	bofC	2704681..2705193 (-)	513	WP_003229715.1	sporulation cell-cell signaling protein BofC	-
KMZ16_RS14110 (KMZ16_13985)	csbX	2705241..2706548 (-)	1308	WP_003246197.1	MFS transporter	-
KMZ16_RS14115 (KMZ16_13990)	iolG	2706619..2707644 (-)	1026	WP_029318179.1	inositol 2-dehydrogenase	-
KMZ16_RS14120 (KMZ16_13995)	yrzF	2707882..2708529 (+)	648	WP_003246159.1	phosphotransferase	-
KMZ16_RS14125 (KMZ16_14000)	-	2708575..2708697 (-)	123	WP_003229707.1	hypothetical protein	-
KMZ16_RS14135 (KMZ16_14005)	-	2708860..2709228 (+)	369	WP_224912982.1	DUF5412 family protein	-
KMZ16_RS14140 (KMZ16_14010)	-	2709235..2709375 (+)	141	WP_004398683.1	hypothetical protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=502535 KMZ16_RS14100 WP_003229717.1 2703937..2704542(-) (ruvA) [Bacillus subtilis subsp. subtilis strain ps4100]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=502535 KMZ16_RS14100 WP_003229717.1 2703937..2704542(-) (ruvA) [Bacillus subtilis subsp. subtilis strain ps4100]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAGGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTACGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAAGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCAGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408