Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   IRB21_RS17800 Genome accession   NZ_CP064089
Coordinates   3391368..3393674 (-) Length   768 a.a.
NCBI ID   WP_017367961.1    Uniprot ID   A0A9X0FXY2
Organism   Bacillus altitudinis strain N435-3     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 3386368..3398674
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IRB21_RS17760 - 3386774..3387205 (+) 432 WP_008345843.1 Na(+)/H(+) antiporter subunit B -
  IRB21_RS17765 - 3387205..3387546 (+) 342 WP_003213576.1 Na(+)/H(+) antiporter subunit C -
  IRB21_RS17770 - 3387539..3389017 (+) 1479 WP_058336867.1 Na+/H+ antiporter subunit D -
  IRB21_RS17775 - 3389024..3389503 (+) 480 WP_008345848.1 Na+/H+ antiporter subunit E -
  IRB21_RS17780 - 3389503..3389784 (+) 282 WP_008345849.1 Na(+)/H(+) antiporter subunit F1 -
  IRB21_RS17785 mnhG 3389768..3390142 (+) 375 WP_003213369.1 monovalent cation/H(+) antiporter subunit G -
  IRB21_RS17790 - 3390233..3390622 (-) 390 WP_017358943.1 hotdog fold thioesterase -
  IRB21_RS17795 comA 3390646..3391287 (-) 642 WP_007500477.1 response regulator transcription factor Regulator
  IRB21_RS17800 comP 3391368..3393674 (-) 2307 WP_017367961.1 ATP-binding protein Regulator
  IRB21_RS17805 comX 3393688..3393858 (-) 171 WP_008345861.1 competence pheromone ComX -
  IRB21_RS17810 - 3393836..3394759 (-) 924 WP_341275289.1 polyprenyl synthetase family protein -
  IRB21_RS17815 degQ 3394911..3395051 (-) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  IRB21_RS17820 - 3395557..3395910 (+) 354 WP_019744042.1 hypothetical protein -
  IRB21_RS17825 - 3395947..3397173 (-) 1227 WP_035701209.1 HDOD domain-containing protein -

Sequence

Protein


Download         Length: 768 a.a.        Molecular weight: 88569.23 Da        Isoelectric Point: 8.2917

>NTDB_id=498982 IRB21_RS17800 WP_017367961.1 3391368..3393674(-) (comP) [Bacillus altitudinis strain N435-3]
MRKFYSKLTVILVILSFIYVIYISYINVFNIFVGAAVKENSQGQLEVVDVDNFTDSYLAGVRKGDIILEVNGNKKPVEEV
KRGFLANVKSLVVDRHGDKIDLENVRLLSQANLFIYLIPVILYSICLFCIFMILKMNKANQKESAYILALFLLAVSIGYV
SSGGSGKGEAISRILVIVTMNIVPPLYMHFMYQYLKELGTEIIRRRVLFYLYLVPVTNVLLVLFYKNKAGPVDLLAYVNL
LSFFVLAFLSIIITIRAAKKLKDNEVSNVLRAFALILISAFSPFMLFFIIPYFFGIYFISPYVVASFVLLIPFFLVYQFM
SNKLYNVDFFMGRIKYYGFLAITPTILVVVLFDFIQKPNANFYTVKFTIITYILMLTVFYFKEIIDFRFRLKRFSEKHNY
QDSVFKFTQLIREASSLHQVLYHLKYTILEVLVVNKAFVLEVKADGQIVEIDESIEESQLWKEYVDQFQDILGEVGKIIG
LDKGFMMKIGERGGHSFVICCLSNLRTPKLTRDEISWLKTLAFYTSVSLENVVKIEELMEHLEDLKQREANPAWLKKVMF
AMEEKQRSDLARDLHDSVLQDLISLKRQSEMFLTNFQNNQCPTSIENSLISWNEQMSKVIQTTRETCHELRPQLLYDLGL
VKAISKLTSQIQEEAPFHIRLNTTRFDKELDIDIDSQLNIYRIVQELLSNALKHSKASQVLVMLICIKDQVVLHYEDDGV
GFDASQLDQHTMSMGLSGIRERVKALNGKLQIHTAPEKGLKVKIEMEL

Nucleotide


Download         Length: 2307 bp        

>NTDB_id=498982 IRB21_RS17800 WP_017367961.1 3391368..3393674(-) (comP) [Bacillus altitudinis strain N435-3]
ATGAGAAAGTTTTACTCTAAGTTAACAGTTATATTAGTTATCCTTAGCTTCATCTATGTGATTTACATCTCTTATATCAA
CGTATTTAATATTTTTGTTGGAGCAGCTGTTAAGGAAAATAGTCAGGGTCAACTTGAGGTAGTGGATGTCGATAATTTTA
CAGATAGCTATCTAGCTGGAGTTAGGAAAGGCGATATCATACTTGAAGTGAATGGGAATAAAAAACCAGTTGAAGAAGTT
AAAAGAGGTTTTTTAGCTAATGTTAAAAGTTTAGTCGTTGATAGACATGGTGATAAAATTGATTTAGAGAATGTAAGGTT
ATTGAGTCAAGCGAATCTGTTTATTTATCTAATACCAGTCATTCTTTATTCCATCTGTCTATTTTGTATATTTATGATTT
TAAAAATGAATAAAGCAAACCAAAAAGAGTCAGCTTATATTTTAGCTTTATTTCTTTTGGCGGTGTCTATAGGTTATGTA
AGTTCTGGTGGTTCTGGAAAAGGAGAGGCTATCAGTCGTATTCTTGTAATCGTTACAATGAATATTGTACCTCCACTATA
TATGCACTTTATGTATCAATATTTAAAAGAATTAGGAACAGAAATTATTCGTCGTCGAGTTCTTTTTTATTTGTATCTAG
TTCCAGTGACTAACGTTTTATTAGTTTTATTCTATAAAAATAAAGCAGGACCAGTAGATCTATTAGCATATGTCAATTTA
CTTTCATTTTTTGTTCTGGCTTTCCTTTCGATTATTATCACTATAAGGGCTGCTAAAAAATTGAAAGACAATGAAGTCAG
CAATGTACTTCGAGCATTTGCACTCATTTTAATCTCAGCATTCAGTCCATTCATGCTATTTTTTATCATTCCTTATTTTT
TTGGTATATATTTTATTTCACCGTATGTTGTTGCATCGTTTGTTCTTTTAATTCCTTTTTTCTTAGTCTATCAATTTATG
TCAAATAAGCTATATAATGTTGATTTCTTTATGGGAAGGATTAAATACTACGGTTTTTTAGCAATTACACCGACAATACT
AGTGGTTGTTCTTTTTGATTTTATTCAAAAGCCAAATGCAAATTTCTATACAGTGAAATTTACGATTATCACGTACATTC
TTATGCTTACCGTCTTCTACTTTAAAGAAATTATCGATTTCCGTTTTCGATTGAAGCGTTTTTCAGAGAAGCATAATTAT
CAGGATAGTGTATTTAAATTTACACAGCTTATTCGTGAGGCGTCATCACTTCATCAAGTATTGTATCATTTAAAATACAC
CATCTTAGAAGTACTTGTTGTGAACAAAGCCTTTGTGCTTGAAGTGAAGGCAGATGGACAAATTGTTGAAATTGATGAAT
CAATAGAAGAAAGCCAGCTATGGAAAGAGTATGTGGATCAATTTCAAGATATTTTAGGTGAAGTTGGTAAAATCATTGGG
CTTGATAAAGGGTTTATGATGAAAATTGGTGAGCGGGGCGGTCACTCGTTTGTGATTTGCTGTTTATCTAATTTACGGAC
ACCTAAGCTGACCCGCGATGAAATTTCATGGCTGAAAACATTGGCATTTTACACAAGTGTCAGTTTAGAAAATGTCGTCA
AGATTGAAGAATTGATGGAGCATCTTGAGGATTTGAAACAGCGGGAAGCCAATCCCGCCTGGCTGAAGAAAGTCATGTTC
GCCATGGAAGAAAAGCAGCGCTCAGATTTAGCGAGGGATCTTCATGATTCTGTGCTGCAGGATTTGATTTCACTGAAGAG
ACAGTCCGAGATGTTCTTAACCAATTTCCAAAACAACCAATGCCCAACATCTATTGAAAATTCATTGATCTCATGGAATG
AACAAATGTCTAAGGTGATTCAAACCACGAGAGAAACATGTCATGAACTTCGGCCTCAGCTCCTCTATGATTTGGGGTTA
GTGAAGGCAATTTCGAAGCTGACTTCGCAAATTCAAGAGGAAGCGCCATTTCATATTAGGCTGAATACAACCCGCTTTGA
TAAAGAACTGGACATTGATATTGACTCACAGCTGAATATTTACCGGATAGTGCAGGAGCTGTTATCCAATGCGTTGAAGC
ATTCTAAGGCCAGCCAAGTCTTAGTGATGCTCATTTGTATTAAAGATCAAGTTGTTCTCCATTATGAGGACGATGGAGTC
GGCTTTGATGCAAGCCAGCTTGATCAGCACACGATGAGCATGGGTCTTTCTGGCATAAGGGAACGAGTCAAAGCTCTAAA
TGGAAAGCTTCAAATTCACACAGCACCTGAAAAAGGGCTCAAGGTGAAAATTGAAATGGAATTGTAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(679-766)

Histidine kinase (HisKA_3)

(567-635)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

49.163

100

0.497