Detailed information NTG0049786

Bioinformatically predicted

Overview

• Name: pepF
• Type: Regulator
• Locus tag: SSUD12_RS03670
• Genome accession: NC_017621
• Coordinates: 721603..723405 (+)
• Length: 600 a.a.
• NCBI ID: WP_014637768.1
• Uniprot ID: G7SDV2
• Organism: Streptococcus suis D12
• Function: degradation of XIP; competence shut-off (predicted from homology) Competence regulation

Genomic Context

Location: 716603..728405

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SSUD12_RS03645 (SSUD12_0702)	-	717029..717622 (-)	594	WP_014637763.1	DUF1361 domain-containing protein	-
SSUD12_RS03650 (SSUD12_0703)	metG	717778..719781 (+)	2004	WP_014637764.1	methionine--tRNA ligase	-
SSUD12_RS03655 (SSUD12_0704)	coiA	719842..720795 (+)	954	WP_014637765.1	competence protein CoiA	Machinery gene
SSUD12_RS03660 (SSUD12_0705)	-	720839..721204 (+)	366	WP_014637766.1	type II toxin-antitoxin system RelE/ParE family toxin	-
SSUD12_RS03665 (SSUD12_0706)	HI0659	721194..721493 (+)	300	WP_014637767.1	helix-turn-helix domain-containing protein	Machinery gene
SSUD12_RS03670 (SSUD12_0707)	pepF	721603..723405 (+)	1803	WP_014637768.1	oligoendopeptidase F	Regulator
SSUD12_RS03675 (SSUD12_0708)	-	723407..723850 (+)	444	WP_014637769.1	hypothetical protein	-
SSUD12_RS03680 (SSUD12_0709)	-	723861..724409 (+)	549	WP_014637770.1	DUF6630 family protein	-
SSUD12_RS11015 (SSUD12_0710)	-	724559..725849 (-)	1291	Protein_671	IS4 family transposase	-
SSUD12_RS03695 (SSUD12_0712)	-	725997..726716 (+)	720	WP_044669888.1	O-methyltransferase	-
SSUD12_RS03700 (SSUD12_0713)	prsA	726778..727761 (+)	984	WP_014637772.1	peptidylprolyl isomerase PrsA	-

Sequence

Protein

• Length: 600 a.a.
• Molecular weight: 69145.30 Da
• Isoelectric Point: 4.5294

>NTDB_id=49786 SSUD12_RS03670 WP_014637768.1 721603..723405(+) (pepF) [Streptococcus suis D12]
MSKQRYEIEEKYQWDLTTIFPTDDAWEAELADLQAETEKTKEFAGHLLDSAKSLLEISETQLGLMRRIEKLYVYASMKND
QDTREGKYQEFQAKAMGLYAAFSQAFAFYEPEFMAITEEQLEAFKVEEPALVQYSHQFEKLLAAKDHVLSQEVEEVLAAT
SEIFETPAETFSVLDNASLRFPEIADEDGHLVPLSHGNYIHFMESKNRDVRQEAYEAMYGTYEQFQHTYAKTLQSNVKVN
NLKARLRKYDSARHASLAANFIPESVYDTLVAAVNKHLPLLHRYINLRKKLLGIDDLKMYDMYTPLSDFSTTISYEDALK
KCQETLEIFGEDYSAIVKEAFENRWIDVHVNEGKRSGAYSGGAYDTNAFMLLNWQDNLDNMYTLIHETGHSLHSMLTRKT
QPYVYGHYSLFLAEIASTTNENLLTEKLLAEVEDDKERFAILNHYLDGFRGTVFRQTQFAEFEQAIYKADQEGQVLTADF
LNELYGQTNEKYYGLSAEENPEIQFEWARIPHFYYNFYVYQYATGFAAASALANKIVNGSPEDKENYLNYLKAGSSDYSL
NVIAKAGVDMTKEDYLNDAFKVFEARLEELEALVEKGVHL

Nucleotide

• Length: 1803 bp

>NTDB_id=49786 SSUD12_RS03670 WP_014637768.1 721603..723405(+) (pepF) [Streptococcus suis D12]
ATGTCTAAACAACGTTACGAAATTGAAGAAAAATACCAGTGGGATTTGACTACTATTTTCCCAACCGATGATGCCTGGGA
GGCAGAACTTGCAGATTTACAAGCTGAAACTGAAAAAACAAAAGAATTTGCAGGTCATTTGCTGGACTCAGCTAAAAGTC
TCTTAGAAATTAGCGAAACGCAACTCGGTCTTATGCGTCGCATTGAAAAACTCTATGTCTATGCGTCTATGAAGAATGAC
CAAGATACTCGCGAAGGAAAATATCAGGAATTTCAAGCTAAGGCCATGGGCTTGTATGCGGCCTTTTCACAGGCTTTTGC
CTTCTATGAGCCTGAATTTATGGCCATTACTGAAGAGCAGCTGGAGGCCTTTAAAGTAGAAGAGCCAGCTCTTGTTCAGT
ACAGCCACCAATTTGAAAAGCTTCTGGCAGCCAAGGACCATGTCCTGTCACAAGAGGTAGAAGAAGTCCTTGCGGCGACC
AGCGAGATTTTCGAAACACCTGCTGAAACCTTCTCAGTCTTGGACAATGCCAGTCTGCGTTTCCCAGAAATCGCAGATGA
AGATGGTCACTTGGTGCCACTTTCACACGGAAACTACATCCACTTTATGGAGTCTAAAAACCGTGATGTCCGCCAAGAAG
CATACGAAGCTATGTACGGTACCTACGAGCAGTTCCAGCATACATACGCTAAGACACTTCAATCTAATGTCAAGGTCAAT
AACCTGAAAGCTCGTTTACGGAAGTACGACTCAGCTCGCCACGCATCACTTGCAGCTAATTTCATTCCAGAATCCGTTTA
TGATACATTAGTGGCGGCAGTCAACAAGCACCTTCCGCTCTTGCACCGTTATATCAATTTGCGTAAGAAACTCCTAGGTA
TTGATGACTTGAAGATGTACGATATGTACACACCATTGTCAGATTTCAGCACCACGATTTCTTATGAAGATGCTCTTAAA
AAATGTCAAGAAACCTTGGAAATCTTCGGCGAAGATTACTCTGCTATCGTAAAAGAAGCCTTCGAAAACCGCTGGATTGA
TGTCCATGTTAATGAAGGAAAACGCTCAGGAGCATATTCAGGAGGTGCCTACGACACCAACGCCTTCATGCTTCTCAACT
GGCAGGATAACTTGGATAACATGTACACCCTTATCCATGAAACAGGCCACTCTCTCCATTCTATGTTGACTCGTAAGACT
CAACCCTATGTCTATGGTCATTATTCCCTCTTCTTGGCAGAAATTGCTTCAACAACCAATGAAAATCTTTTGACAGAAAA
ACTCTTGGCAGAAGTAGAAGATGACAAGGAACGCTTTGCGATTCTTAACCATTACCTAGATGGTTTCCGTGGTACAGTCT
TCCGCCAGACCCAATTTGCCGAGTTTGAGCAAGCTATCTATAAGGCAGACCAGGAAGGTCAGGTCTTGACGGCTGATTTC
CTCAATGAATTGTACGGTCAGACTAACGAGAAATACTACGGACTTTCTGCCGAAGAAAATCCAGAAATCCAGTTTGAGTG
GGCTCGTATTCCACACTTCTATTACAATTTCTATGTCTATCAATATGCGACAGGTTTTGCGGCAGCATCAGCTCTAGCAA
ACAAGATTGTCAATGGTAGCCCAGAAGACAAAGAAAACTACCTCAACTACTTGAAGGCTGGTAGCTCAGATTATTCCCTC
AATGTCATCGCTAAGGCTGGCGTAGACATGACCAAGGAAGATTACCTCAATGATGCCTTCAAGGTATTTGAAGCTCGTTT
GGAAGAATTAGAAGCTCTCGTTGAGAAAGGTGTGCACCTCTAA

Domains

Predicted by InterproScan.

• Oligopeptidase F (Peptidase_M3_N) (112-181)

• Peptidase family M3 (Peptidase_M3) (202-581)

3D structure

• AlphaFold DB: G7SDV2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pepF	Streptococcus salivarius strain HSISS4	69.667	100	0.697