Detailed information NTG0497656

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: KIH30_RS11125
• Genome accession: NZ_CP075343
• Coordinates: 2488739..2490025 (-)
• Length: 428 a.a.
• NCBI ID: WP_019527658.1
• Uniprot ID: A0ACC6UKT1
• Organism: Streptomyces sp. EMB24
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2483739..2495025

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KIH30_RS11110	-	2483932..2486556 (-)	2625	WP_268219842.1	valine--tRNA ligase	-
KIH30_RS11115	-	2486693..2487679 (+)	987	WP_268219843.1	hypothetical protein	-
KIH30_RS11120	-	2487717..2488670 (+)	954	WP_199208632.1	hypothetical protein	-
KIH30_RS11125	clpX	2488739..2490025 (-)	1287	WP_019527658.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
KIH30_RS11130	clpP	2490209..2490916 (-)	708	WP_033276868.1	ATP-dependent Clp protease proteolytic subunit	Regulator
KIH30_RS11135	-	2491026..2491631 (-)	606	WP_006133589.1	ATP-dependent Clp protease proteolytic subunit	-
KIH30_RS11140	tig	2491932..2493329 (-)	1398	WP_268219844.1	trigger factor	-
KIH30_RS11155	-	2493876..2495009 (-)	1134	WP_268219845.1	tyrosine-type recombinase/integrase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46789.57 Da
• Isoelectric Point: 4.7360

>NTDB_id=497656 KIH30_RS11125 WP_019527658.1 2488739..2490025(-) (clpX) [Streptomyces sp. EMB24]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEA
AKKALSVAVYNHYKRVQAGENGGAQGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIEGRAGAKGIGFGATIRSKREMESKDQFEEVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQGVMYEVPSRKDVARVVIT
ADVVLSNVNPTLIPRDSRGRGSGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=497656 KIH30_RS11125 WP_019527658.1 2488739..2490025(-) (clpX) [Streptomyces sp. EMB24]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGGCCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAGGAGCTCGCCGAGACCA
GCGAGGTCCGGTGGGAGGAGCTCCCCAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGGTACGTGGTGGGCCAGGAGGCG
GCCAAGAAGGCCCTCTCCGTGGCGGTCTACAACCACTACAAGCGCGTCCAGGCCGGGGAGAACGGCGGCGCCCAGGGCCG
TGACGACGCCATCGAGCTGGCGAAGTCCAACATCCTGCTGCTGGGCCCCACGGGCTCCGGCAAGACCCTGTTGGCGCAGA
CCCTCGCCCGCATGCTGAACGTCCCGTTCGCGATCGCCGACGCCACGGCGCTCACCGAGGCCGGCTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTCAAGCTGATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGGAAGAGCGAAAACCCGTCGATCACGCGGGACGTGAGCGGCGAGGGCGTGCAGCAGGCGC
TGCTGAAGATCCTCGAGGGCACCACCGCCTCGGTGCCGCCGCAGGGCGGGCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGCGCCTTCGCCGGTCTTGAGAAGATCATCGAGGGCCGGGCGGGCGC
CAAGGGTATCGGCTTCGGCGCGACGATCCGCTCCAAGCGGGAGATGGAGTCCAAGGACCAGTTCGAGGAGGTCATGCCGG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGCCGGCTCCCCGTCATCACCAGCGTGCACAACCTCGACCGC
GAGGCTCTGCTGCAGATCCTCGTCGAGCCGCGCAACGCGCTGGTGAAGCAGTACCAAAGGCTGTTCGAACTCGACGGTGT
GGAGCTGGACTTCGAGCGTGAGGCGCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCCAGACCGGCGCCCGCGGCCTGC
GCGCCATCATGGAGGAGGTCCTCCAGGGCGTGATGTACGAGGTGCCGTCCCGCAAGGACGTGGCCCGCGTGGTCATCACC
GCGGACGTGGTGCTGTCCAACGTCAACCCGACGCTCATCCCGCGCGACTCGCGCGGCCGCGGCTCGGGCGAGCAGAAGAC
GGCATAA

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.935	93.925	0.591
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.745	96.028	0.526