Detailed information
Bioinformatically predicted
Overview
| Name | comX/sigX | Type | Regulator |
| Locus tag | SSUD9_RS00440 | Genome accession | NC_017620 |
| Coordinates | 75706..75972 (+) | Length | 88 a.a. |
| NCBI ID | WP_002939335.1 | Uniprot ID | A0A126UJ45 |
| Organism | Streptococcus suis D9 | ||
| Function | activate transcription of late competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 70706..80972
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SSUD9_RS00410 (SSUD9_0069) | recA | 71595..72746 (+) | 1152 | WP_011922545.1 | recombinase RecA | Machinery gene |
| SSUD9_RS00415 (SSUD9_0070) | spx | 72982..73380 (+) | 399 | WP_002939362.1 | transcriptional regulator Spx | - |
| SSUD9_RS00420 (SSUD9_0071) | - | 73480..73746 (+) | 267 | WP_002939360.1 | IreB family regulatory phosphoprotein | - |
| SSUD9_RS00425 (SSUD9_0072) | ruvX | 73746..74165 (+) | 420 | WP_002939356.1 | Holliday junction resolvase RuvX | - |
| SSUD9_RS00430 (SSUD9_0073) | - | 74177..74497 (+) | 321 | WP_002939343.1 | DUF1292 domain-containing protein | - |
| SSUD9_RS00435 (SSUD9_0074) | - | 75055..75633 (+) | 579 | WP_044675891.1 | nucleotidyltransferase family protein | - |
| SSUD9_RS00440 (SSUD9_0075) | comX/sigX | 75706..75972 (+) | 267 | WP_002939335.1 | hypothetical protein | Regulator |
| SSUD9_RS00445 (SSUD9_0076) | rpsJ | 76294..76602 (+) | 309 | WP_014636748.1 | 30S ribosomal protein S10 | - |
| SSUD9_RS00450 (SSUD9_0077) | rplC | 76815..77441 (+) | 627 | WP_011921686.1 | 50S ribosomal protein L3 | - |
| SSUD9_RS00455 (SSUD9_0078) | rplD | 77466..78089 (+) | 624 | WP_004195490.1 | 50S ribosomal protein L4 | - |
| SSUD9_RS00460 (SSUD9_0079) | - | 78089..78388 (+) | 300 | WP_004195491.1 | 50S ribosomal protein L23 | - |
| SSUD9_RS00465 (SSUD9_0080) | rplB | 78406..79239 (+) | 834 | WP_002936663.1 | 50S ribosomal protein L2 | - |
| SSUD9_RS00470 (SSUD9_0081) | rpsS | 79341..79622 (+) | 282 | WP_000533766.1 | 30S ribosomal protein S19 | - |
| SSUD9_RS00475 (SSUD9_0082) | rplV | 79640..79984 (+) | 345 | WP_002936662.1 | 50S ribosomal protein L22 | - |
| SSUD9_RS00480 (SSUD9_0083) | rpsC | 79997..80650 (+) | 654 | WP_002936661.1 | 30S ribosomal protein S3 | - |
Sequence
Protein
Download Length: 88 a.a. Molecular weight: 10717.52 Da Isoelectric Point: 9.1949
>NTDB_id=49712 SSUD9_RS00440 WP_002939335.1 75706..75972(+) (comX/sigX) [Streptococcus suis D9]
MEFETVCLKVRNLGRLYCYFKVKFRNHIEAIIRKQESQKCKFDRLFHEDIHSLIQSPSLGNDELLMLWGLLRDYRKNLIN
DRLENMKN
MEFETVCLKVRNLGRLYCYFKVKFRNHIEAIIRKQESQKCKFDRLFHEDIHSLIQSPSLGNDELLMLWGLLRDYRKNLIN
DRLENMKN
Nucleotide
Download Length: 267 bp
>NTDB_id=49712 SSUD9_RS00440 WP_002939335.1 75706..75972(+) (comX/sigX) [Streptococcus suis D9]
ATGGAATTTGAAACGGTTTGTTTGAAGGTTAGAAACTTAGGTAGGCTATATTGCTACTTCAAAGTTAAATTTAGAAACCA
TATCGAGGCTATAATTCGTAAACAGGAAAGTCAAAAATGTAAATTTGATCGTCTCTTCCATGAAGATATTCATAGTTTGA
TTCAATCACCGAGCTTGGGTAATGATGAGTTGCTGATGTTATGGGGTCTCCTGAGAGATTATCGAAAAAATTTAATCAAT
GACCGACTTGAAAATATGAAAAATTGA
ATGGAATTTGAAACGGTTTGTTTGAAGGTTAGAAACTTAGGTAGGCTATATTGCTACTTCAAAGTTAAATTTAGAAACCA
TATCGAGGCTATAATTCGTAAACAGGAAAGTCAAAAATGTAAATTTGATCGTCTCTTCCATGAAGATATTCATAGTTTGA
TTCAATCACCGAGCTTGGGTAATGATGAGTTGCTGATGTTATGGGGTCTCCTGAGAGATTATCGAAAAAATTTAATCAAT
GACCGACTTGAAAATATGAAAAATTGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comX/sigX | Streptococcus suis D9 |
73.973 |
82.955 |
0.614 |
| comX/sigX | Streptococcus suis isolate S10 |
72.603 |
82.955 |
0.602 |
| comX/sigX | Streptococcus suis P1/7 |
72.603 |
82.955 |
0.602 |
| comX/sigX/comX1/sigX1 | Streptococcus mitis NCTC 12261 |
39.506 |
92.045 |
0.364 |
| comX/sigX/comX2/sigX2 | Streptococcus mitis NCTC 12261 |
39.506 |
92.045 |
0.364 |