Detailed information NTG0496283

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: BACVE_RS11135
• Genome accession: NZ_CP063687
• Coordinates: 2211053..2212216 (+)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain NST6
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 2206053..2217216

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BACVE_RS11115 (BACVE_002245)	-	2206481..2207677 (+)	1197	WP_071182023.1	glycosyltransferase	-
BACVE_RS11120 (BACVE_002246)	-	2207809..2208885 (+)	1077	WP_003151382.1	MraY family glycosyltransferase	-
BACVE_RS11125 (BACVE_002247)	-	2208985..2210178 (-)	1194	WP_128974134.1	LCP family protein	-
BACVE_RS11130 (BACVE_002248)	-	2210183..2210830 (-)	648	WP_060657503.1	YigZ family protein	-
BACVE_RS11135 (BACVE_002249)	degS	2211053..2212216 (+)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
BACVE_RS11140 (BACVE_002250)	degU	2212293..2212982 (+)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
BACVE_RS11145 (BACVE_002251)	-	2213080..2213928 (+)	849	WP_003151387.1	DegV family protein	-
BACVE_RS11150 (BACVE_002252)	comFA	2214036..2215421 (+)	1386	WP_063636495.1	DEAD/DEAH box helicase	Machinery gene
BACVE_RS11155 (BACVE_002253)	-	2215479..2215763 (+)	285	WP_022553866.1	competence protein ComFB	-
BACVE_RS11160 (BACVE_002254)	comFC	2215769..2216458 (+)	690	WP_199803302.1	phosphoribosyltransferase family protein	Machinery gene
BACVE_RS11165 (BACVE_002255)	-	2216532..2216951 (+)	420	WP_014419009.1	TIGR03826 family flagellar region protein	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=496283 BACVE_RS11135 WP_003151385.1 2211053..2212216(+) (degS) [Bacillus velezensis strain NST6]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=496283 BACVE_RS11135 WP_003151385.1 2211053..2212216(+) (degS) [Bacillus velezensis strain NST6]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTCCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948