Detailed information NTG0049570

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: SSGZ1_RS00770
• Genome accession: NC_017617
• Coordinates: 121512..121946 (+)
• Length: 144 a.a.
• NCBI ID: WP_011922561.1
• Uniprot ID: -
• Organism: Streptococcus suis GZ1
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 116512..126946

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SSGZ1_RS00735 (SSGZ1_0117)	-	117260..117625 (+)	366	WP_002936568.1	DUF1033 family protein	-
SSGZ1_RS00740 (SSGZ1_0119)	-	117660..118603 (-)	944	Protein_114	S66 peptidase family protein	-
SSGZ1_RS00745 (SSGZ1_0120)	comYA	118689..119639 (+)	951	WP_011921718.1	competence type IV pilus ATPase ComGA	Machinery gene
SSGZ1_RS00750 (SSGZ1_0121)	comYB	119551..120588 (+)	1038	WP_011921719.1	competence type IV pilus assembly protein ComGB	Machinery gene
SSGZ1_RS00755 (SSGZ1_0122)	comYC	120590..120871 (+)	282	WP_011921720.1	competence type IV pilus major pilin ComGC	Machinery gene
SSGZ1_RS00760 (SSGZ1_0123)	comGD	120852..121260 (+)	409	Protein_118	competence type IV pilus minor pilin ComGD	-
SSGZ1_RS00765 (SSGZ1_0124)	comYE	121232..121525 (+)	294	WP_011921722.1	competence type IV pilus minor pilin ComGE	Machinery gene
SSGZ1_RS00770 (SSGZ1_0125)	comGF/cglF	121512..121946 (+)	435	WP_011922561.1	competence type IV pilus minor pilin ComGF	Machinery gene
SSGZ1_RS00775 (SSGZ1_0126)	comGG	121924..122334 (+)	411	WP_011921724.1	competence type IV pilus minor pilin ComGG	-
SSGZ1_RS00780 (SSGZ1_0127)	comYH	122391..123344 (+)	954	WP_011922562.1	class I SAM-dependent methyltransferase	Machinery gene
SSGZ1_RS00785 (SSGZ1_0128)	-	123394..124581 (+)	1188	WP_012775422.1	acetate kinase	-
SSGZ1_RS00790 (SSGZ1_0129)	-	124896..125447 (+)	552	WP_012774908.1	folate family ECF transporter S component	-
SSGZ1_RS00795 (SSGZ1_0130)	-	125503..126759 (+)	1257	WP_011921729.1	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 16491.85 Da
• Isoelectric Point: 5.9234

>NTDB_id=49570 SSGZ1_RS00770 WP_011922561.1 121512..121946(+) (comGF/cglF) [Streptococcus suis GZ1]
MLKSKIPAFTLLECLVVLVILSGSLLIFEGLSKLLVQEAHYQGQTVQKEWLVFSSQLRSEWDQAELVKVENGKVYVNKGE
QALAFGKSWSDDFRKTNDRGQGYQPMLYQVDSAAISQENQLVRIDFSFKNGEERTFIYAFKEKS

Nucleotide

• Length: 435 bp

>NTDB_id=49570 SSGZ1_RS00770 WP_011922561.1 121512..121946(+) (comGF/cglF) [Streptococcus suis GZ1]
TTGTTAAAAAGTAAAATTCCTGCTTTTACACTCTTGGAATGTTTGGTGGTTCTAGTCATTCTGTCAGGTAGCCTCTTGAT
TTTTGAAGGCTTATCCAAATTACTAGTCCAGGAAGCGCATTATCAAGGTCAGACCGTTCAAAAGGAATGGTTGGTCTTCT
CTAGCCAATTGCGGTCGGAGTGGGACCAGGCTGAATTGGTCAAGGTTGAAAATGGCAAGGTCTATGTCAACAAAGGTGAA
CAGGCTTTGGCCTTTGGCAAGTCATGGTCGGATGATTTTCGGAAAACAAATGATAGAGGCCAGGGTTACCAACCCATGCT
CTATCAGGTGGATAGCGCAGCCATTTCCCAAGAAAACCAGCTGGTGCGCATCGACTTTAGCTTTAAAAACGGAGAGGAGC
GAACCTTTATCTATGCTTTTAAAGAAAAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (37-134)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae TIGR4	52.482	97.917	0.514
comGF/cglF	Streptococcus pneumoniae Rx1	52.482	97.917	0.514
comGF/cglF	Streptococcus pneumoniae D39	52.482	97.917	0.514
comGF/cglF	Streptococcus pneumoniae R6	52.482	97.917	0.514
comGF/cglF	Streptococcus mitis NCTC 12261	52.985	93.056	0.493
comYF	Streptococcus mutans UA140	48.611	100	0.486
comYF	Streptococcus mutans UA159	47.917	100	0.479
comGF/cglF	Streptococcus mitis SK321	50	93.056	0.465
comGF	Lactococcus lactis subsp. cremoris KW2	45.39	97.917	0.444