Detailed information NTG0494655

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: IM687_RS17985
• Genome accession: NZ_CP063358
• Coordinates: 3782162..3783499 (+)
• Length: 445 a.a.
• NCBI ID: WP_196112441.1
• Uniprot ID: -
• Organism: Stutzerimonas stutzeri strain ZDHY95
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 3777162..3788499

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IM687_RS17960 (IM687_17960)	pgeF	3777192..3777929 (-)	738	WP_196111546.1	peptidoglycan editing factor PgeF	-
IM687_RS17965 (IM687_17965)	rluD	3777926..3778900 (-)	975	WP_011914661.1	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	-
IM687_RS17970 (IM687_17970)	-	3779105..3780094 (+)	990	WP_013984073.1	outer membrane protein assembly factor BamD	-
IM687_RS17975 (IM687_17975)	-	3780216..3780449 (+)	234	WP_196111547.1	PP0621 family protein	-
IM687_RS17980 (IM687_17980)	pilS	3780439..3782031 (+)	1593	WP_196111548.1	sensor histidine kinase	Regulator
IM687_RS17985 (IM687_17985)	pilR	3782162..3783499 (+)	1338	WP_196112441.1	sigma-54-dependent transcriptional regulator	Regulator
IM687_RS17990 (IM687_17990)	-	3783543..3784601 (-)	1059	WP_011914666.1	DUF2333 family protein	-
IM687_RS17995 (IM687_17995)	-	3784820..3786415 (+)	1596	WP_014597755.1	response regulator	-

Sequence

Protein

• Length: 445 a.a.
• Molecular weight: 49548.05 Da
• Isoelectric Point: 6.4140

>NTDB_id=494655 IM687_RS17985 WP_196112441.1 3782162..3783499(+) (pilR) [Stutzerimonas stutzeri strain ZDHY95]
MTARQKALIIDDEPDIRELLEITLGRMKLDTRSARNLKEARELLAREHYDLCLTDMRLPDGSGLELVQHIQQQYPQLPVA
MITAYGSLDTAIGALKAGAFDFLTKPVDLNRLRELVSTALRLRASAAEAPVDSRLLGSSPPMKTLRKQIGKLARSQAPVY
ISGESGSGKELVARLIHEQGPRSEKPFVPVNCGAIPSELMESEFFGHKKGSFSGAIEDKPGLFQAANGGTLFLDEVADLP
LPMQVKLLRAIQEKAVRAVGGAQEVMVDVRILCATHKDLASEVAAGRFRQDLYYRLNVIELRVPPLRERREDIGLLADVM
LRRLAQECGEATARLHPDALAKLENYRFPGNVRELENMLERAYTLCEGDEIKAGDLRLADSPGLPENGEASLAQIDNLED
HLEEIERKLIMQALEETRWNRTAAAQRLGLTFRSMRYRLKKLGLD

Nucleotide

• Length: 1338 bp

>NTDB_id=494655 IM687_RS17985 WP_196112441.1 3782162..3783499(+) (pilR) [Stutzerimonas stutzeri strain ZDHY95]
ATGACCGCGCGCCAGAAAGCCCTGATCATCGACGACGAGCCGGACATCCGCGAGCTGCTGGAGATCACCCTCGGCCGCAT
GAAGCTCGATACCCGCAGCGCACGCAACCTCAAGGAGGCGCGCGAGCTGCTGGCACGCGAGCACTACGACCTGTGCCTGA
CCGATATGCGCCTGCCCGACGGCAGTGGCCTTGAGCTGGTCCAGCACATCCAGCAACAGTACCCGCAACTGCCCGTGGCG
ATGATCACCGCCTATGGCAGCCTGGATACCGCCATCGGTGCACTCAAGGCCGGTGCGTTCGACTTCCTCACCAAACCGGT
GGATCTGAACCGCCTGCGCGAGCTGGTCAGCACCGCCCTGCGCCTGCGCGCGTCCGCAGCCGAAGCGCCGGTGGACAGTC
GCCTGCTGGGCAGCTCGCCGCCGATGAAAACCTTGCGCAAGCAGATCGGCAAGCTCGCCCGCAGCCAGGCACCCGTCTAC
ATCAGCGGCGAGTCGGGCAGCGGCAAGGAACTGGTGGCACGCCTGATTCACGAGCAGGGCCCGCGCAGCGAAAAGCCATT
CGTGCCGGTCAACTGCGGTGCCATTCCGTCGGAGCTGATGGAAAGCGAGTTCTTCGGCCACAAGAAGGGCAGCTTCAGCG
GCGCCATCGAGGACAAGCCCGGCCTGTTCCAGGCCGCGAACGGTGGCACGCTGTTTCTCGACGAGGTGGCGGACCTGCCG
CTGCCGATGCAGGTCAAGCTGCTGCGCGCCATCCAGGAAAAGGCCGTGCGTGCCGTTGGCGGTGCGCAGGAAGTGATGGT
CGATGTACGCATCCTCTGTGCCACCCACAAGGATCTCGCCAGCGAGGTCGCCGCAGGCCGTTTTCGCCAGGATCTCTACT
ACCGCCTGAATGTCATCGAACTGCGTGTACCGCCACTACGCGAACGCCGGGAAGACATCGGCCTGCTCGCCGATGTCATG
CTGCGCCGTCTGGCGCAGGAATGCGGCGAGGCCACGGCCCGCCTGCATCCCGATGCCCTGGCCAAGCTGGAGAACTATCG
CTTTCCGGGCAACGTCCGCGAGCTGGAGAACATGCTCGAACGCGCCTACACCCTGTGCGAAGGCGACGAGATCAAGGCTG
GCGACCTGCGCCTGGCGGATAGCCCCGGCCTGCCGGAAAACGGCGAAGCCAGCCTGGCGCAGATCGACAACCTGGAGGAC
CACCTGGAGGAGATCGAGCGCAAGCTGATCATGCAGGCCCTCGAAGAAACACGCTGGAACCGCACCGCGGCCGCCCAGCG
ACTGGGGCTGACCTTCCGCTCGATGCGTTACCGTCTGAAGAAACTCGGCCTGGACTAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (8-116)

• Bacterial regulatory protein, Fis family (HTH_8) (402-442)

• Sigma-54 interaction domain (Sigma54_activat) (136-301)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	85.36	99.775	0.852
pilR	Acinetobacter baumannii strain A118	50.545	100	0.521
luxO	Vibrio cholerae strain A1552	38.341	100	0.384