Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   SALIVA_RS03165 Genome accession   NC_017595
Coordinates   645174..646175 (+) Length   333 a.a.
NCBI ID   WP_014634136.1    Uniprot ID   A0A1V0H5P5
Organism   Streptococcus salivarius JIM8777     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 640174..651175
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SALIVA_RS03145 (SALIVA_0637) smpB 641295..641759 (+) 465 WP_014634133.1 SsrA-binding protein SmpB -
  SALIVA_RS03150 (SALIVA_0638) - 641906..643312 (+) 1407 WP_014634134.1 Cof-type HAD-IIB family hydrolase -
  SALIVA_RS03155 (SALIVA_0639) - 643314..643682 (+) 369 WP_002886108.1 S1 RNA-binding domain-containing protein -
  SALIVA_RS03160 (SALIVA_0640) - 643779..644861 (-) 1083 WP_014634135.1 Xaa-Pro peptidase family protein -
  SALIVA_RS03165 (SALIVA_0641) ccpA 645174..646175 (+) 1002 WP_014634136.1 catabolite control protein A Regulator
  SALIVA_RS03170 (SALIVA_0642) - 646235..647302 (+) 1068 WP_014634137.1 MmcQ/YjbR family DNA-binding protein -
  SALIVA_RS03175 (SALIVA_0643) - 647315..648430 (+) 1116 WP_014634138.1 glycerate kinase -
  SALIVA_RS03180 (SALIVA_0644) - 648461..648916 (-) 456 WP_014634139.1 YueI family protein -
  SALIVA_RS03185 (SALIVA_0645) eno 649122..650426 (+) 1305 WP_002886048.1 surface-displayed alpha-enolase -
  SALIVA_RS03190 (SALIVA_0646) - 650578..650763 (-) 186 WP_014634140.1 hypothetical protein -

Sequence


Protein


Download         Length: 333 a.a.        Molecular weight: 36646.55 Da        Isoelectric Point: 5.4827

>NTDB_id=49461 SALIVA_RS03165 WP_014634136.1 645174..646175(+) (ccpA) [Streptococcus salivarius JIM8777]
MNTDETITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFA
TLARGIDDIATMYKYNIVLASSDENDDHEVTVINSLFAKQVDGIIFMGYHLTEKIRAEFSRTRTPIVLAGTVDLEHQLPS
VNIDYKAAVEDSVTQLAKNNEKVAFVSGPLIDDINGKLRLAGYKAGLEKNNLRYNEGLVFEAKYSYKDGFDLAQRVLNSG
ATAAYVGEDELAAGLLNGLFAAGKSVPEDFEIITSNDSPITSYTRPNLSSINHPLYDLGAVSMRMLTKIMNKEELEEKDV
ILNHGITLRQSTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=49461 SALIVA_RS03165 WP_014634136.1 645174..646175(+) (ccpA) [Streptococcus salivarius JIM8777]
ATGAATACTGATGAAACAATTACTATATACGACGTTGCGCGTGAAGCAGGTGTTTCGATGGCGACTGTGTCTCGTGTGGT
AAATGGAAATAAAAATGTAAAAGAAAACACCCGAAAAAAAGTGCTTGAGGTCATTGATCGTTTGGATTACCGTCCAAATG
CGGTTGCGCGTGGCTTGGCGAGTAAGAAAACCACTACTGTAGGAGTTGTTATTCCAAATATTGCTAATAGTTATTTTGCT
ACTTTAGCAAGGGGGATTGATGATATTGCTACGATGTACAAGTACAATATTGTTCTTGCATCTAGTGATGAAAATGACGA
TCATGAAGTTACCGTGATTAACTCTCTATTTGCCAAACAAGTAGACGGTATCATCTTCATGGGTTACCACTTGACGGAAA
AAATTCGTGCAGAATTTTCTCGTACCCGTACGCCGATTGTTCTAGCAGGAACAGTAGACCTCGAACACCAATTACCGAGT
GTTAACATCGACTATAAAGCTGCCGTTGAGGATTCTGTAACGCAGCTTGCCAAGAATAATGAAAAGGTTGCCTTTGTATC
AGGACCACTAATTGATGATATTAATGGCAAGCTCCGTCTAGCTGGTTATAAGGCTGGACTTGAAAAGAATAATTTGCGCT
ACAATGAAGGACTTGTCTTTGAAGCTAAATATAGCTATAAAGACGGCTTTGATTTAGCACAACGTGTCTTGAACTCTGGT
GCCACTGCTGCCTATGTTGGGGAAGATGAATTGGCTGCGGGTCTCTTGAATGGCCTCTTTGCTGCAGGTAAATCAGTTCC
AGAAGACTTCGAAATCATCACAAGCAATGACTCACCAATTACAAGCTACACACGTCCAAACCTTTCTAGTATTAATCATC
CTCTCTATGATTTAGGGGCAGTTAGCATGCGTATGTTGACTAAAATCATGAATAAGGAAGAGCTTGAAGAAAAAGATGTT
ATTCTTAATCACGGTATTACCTTACGTCAGTCAACAAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1V0H5P5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

77.477

100

0.775

  ccpA Streptococcus pneumoniae D39

75.976

100

0.76

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

55.891

99.399

0.556


Multiple sequence alignment