Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   IM723_RS03205 Genome accession   NZ_CP063275
Coordinates   595499..596500 (+) Length   333 a.a.
NCBI ID   WP_004197422.1    Uniprot ID   Q9L6X0
Organism   Streptococcus thermophilus strain DMST-H2     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 590499..601500
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IM723_RS03185 smpB 591605..592069 (+) 465 WP_002950240.1 SsrA-binding protein SmpB -
  IM723_RS03190 - 592223..593629 (+) 1407 WP_173940505.1 Cof-type HAD-IIB family hydrolase -
  IM723_RS03195 - 593631..593996 (+) 366 WP_002950243.1 S1 RNA-binding domain-containing protein -
  IM723_RS03200 - 594099..595184 (-) 1086 WP_011225703.1 Xaa-Pro peptidase family protein -
  IM723_RS03205 ccpA 595499..596500 (+) 1002 WP_004197422.1 catabolite control protein A Regulator
  IM723_RS03215 - 596974..597627 (+) 654 WP_244810414.1 MmcQ/YjbR family DNA-binding protein -
  IM723_RS03220 - 597642..598757 (+) 1116 WP_211836986.1 glycerate kinase -
  IM723_RS03225 - 598796..599251 (-) 456 WP_002950250.1 YueI family protein -
  IM723_RS03230 eno 599460..600764 (+) 1305 WP_011225708.1 surface-displayed alpha-enolase -
  IM723_RS03235 - 600916..601101 (-) 186 WP_065973014.1 hypothetical protein -

Sequence

Protein


Download         Length: 333 a.a.        Molecular weight: 36597.53 Da        Isoelectric Point: 5.8841

>NTDB_id=494158 IM723_RS03205 WP_004197422.1 595499..596500(+) (ccpA) [Streptococcus thermophilus strain DMST-H2]
MNTDETITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIVNSYFA
TLAKGIDDIATMYKYNIVLASSDDNEDHEVTVIHSLISKQVDGIIFMGHHLTEKIRAEFSRTRTPIVLAGTVDLEHQLPS
VNIDYKAAVEDCVTQLAKNNEKVAFVSGPLIDDINGKLRLAGYKSGLEKNNLSYNEGLVFEAKYSYKDGFELAQRVLNSG
ATAAYVGEDELAAGLLNGLFAAGKSVPEDFEIITSNDSPVTSYTRPNLSSINHPLYDLGAVSMRMLTKIMHKEELEDKDV
ILNHGLTLRQSTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=494158 IM723_RS03205 WP_004197422.1 595499..596500(+) (ccpA) [Streptococcus thermophilus strain DMST-H2]
ATGAATACTGATGAAACAATCACAATTTATGATGTAGCGCGTGAAGCTGGAGTATCGATGGCAACTGTTTCTCGTGTTGT
AAATGGTAACAAAAACGTAAAAGAAAACACCCGAAAAAAAGTGCTTGAAGTCATTGATCGTTTGGATTACCGTCCAAATG
CGGTTGCGCGTGGCTTGGCGAGTAAAAAAACAACTACTGTAGGAGTTGTCATTCCAAATATTGTAAATAGCTATTTTGCT
ACTCTAGCTAAAGGTATTGATGACATTGCAACCATGTATAAGTATAATATTGTTCTTGCTTCCAGTGATGATAATGAGGA
TCATGAAGTTACAGTCATTCATTCTCTAATTTCTAAACAAGTTGATGGTATTATTTTTATGGGACACCATCTGACAGAAA
AAATCCGTGCAGAATTCTCTCGTACCCGTACACCGATTGTTCTAGCAGGAACAGTTGATCTCGAACACCAATTACCAAGT
GTTAACATCGACTATAAAGCTGCCGTTGAGGATTGTGTAACGCAACTTGCTAAAAATAATGAAAAGGTTGCCTTTGTATC
AGGACCACTAATTGATGATATTAATGGCAAACTACGTTTGGCCGGGTATAAGTCTGGACTTGAAAAGAATAATTTGAGCT
ACAACGAAGGACTTGTCTTTGAAGCTAAATATAGCTATAAAGACGGCTTTGAGTTAGCACAACGTGTCTTGAACTCTGGT
GCCACTGCTGCCTATGTTGGGGAAGATGAATTGGCTGCAGGTCTCTTGAATGGCCTCTTTGCTGCAGGCAAATCAGTTCC
AGAAGATTTCGAAATCATCACAAGCAATGATTCACCGGTTACAAGCTACACACGTCCAAACCTTTCTAGTATAAACCATC
CTCTCTATGATTTAGGGGCAGTTAGCATGCGTATGTTGACTAAAATTATGCATAAGGAAGAACTTGAAGATAAAGACGTT
ATTCTTAATCATGGTCTAACTTTACGCCAGTCAACAAAATAA

Domains

Predicted by InterproScan.

Periplasmic binding protein-like domain (Peripla_BP_3)

(182-332)

Bacterial regulatory proteins, lacI family (LacI)

(8-53)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q9L6X0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

76.276

100

0.763
  ccpA Streptococcus pneumoniae D39

75.375

100

0.754
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

54.985

99.399

0.547