Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   SSAL_RS06905 Genome accession   NC_017594
Coordinates   1503077..1504078 (-) Length   333 a.a.
NCBI ID   WP_014633398.1    Uniprot ID   -
Organism   Streptococcus salivarius 57.I     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1498077..1509078
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SSAL_RS06885 (Ssal_01522) - 1498777..1499232 (+) 456 WP_014633394.1 YueI family protein -
  SSAL_RS06890 (Ssal_01523) - 1499218..1500693 (-) 1476 WP_014633395.1 IS1182-like element ISSth2 family transposase -
  SSAL_RS06895 (Ssal_01524) - 1500822..1501937 (-) 1116 WP_014633396.1 glycerate kinase -
  SSAL_RS06900 (Ssal_01525) - 1501950..1503017 (-) 1068 WP_014633397.1 MmcQ/YjbR family DNA-binding protein -
  SSAL_RS06905 (Ssal_01526) ccpA 1503077..1504078 (-) 1002 WP_014633398.1 catabolite control protein A Regulator
  SSAL_RS06910 (Ssal_01528) - 1504392..1505477 (+) 1086 WP_014633399.1 Xaa-Pro peptidase family protein -
  SSAL_RS06915 (Ssal_01529) - 1505575..1505943 (-) 369 WP_002886108.1 S1 RNA-binding domain-containing protein -
  SSAL_RS06920 (Ssal_01530) - 1505945..1507351 (-) 1407 WP_013990903.1 Cof-type HAD-IIB family hydrolase -
  SSAL_RS06925 (Ssal_01531) smpB 1507498..1507962 (-) 465 WP_002885905.1 SsrA-binding protein SmpB -

Sequence

Protein


Download         Length: 333 a.a.        Molecular weight: 36574.48 Da        Isoelectric Point: 5.7500

>NTDB_id=49410 SSAL_RS06905 WP_014633398.1 1503077..1504078(-) (ccpA) [Streptococcus salivarius 57.I]
MNTDETITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFA
TLARGIDDIATMYKYNIVLASSDENDDHEVTVINSLFAKQVDGIIFMGYHLTEKIRAEFSRTRTPIVLAGTVDLEHQLPS
VNIDYKAAVEDSVTQLAKNNEKVAFVSGPLIDDINGKLRLAGYKAGLEKNNLRYNEGLVFEAKYSYKDGFDLAQRVLNSG
ATAAYVGEDELAAGLLNGLFAAGKSVPEDFEIITSNDSPITSYTRPNLSSINHPLYDLGAVSMRMLTKIMNKEGLEEKDV
ILNHGLTLRQSTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=49410 SSAL_RS06905 WP_014633398.1 1503077..1504078(-) (ccpA) [Streptococcus salivarius 57.I]
ATGAATACTGATGAAACAATTACTATATACGACGTTGCGCGTGAAGCAGGTGTTTCGATGGCGACTGTGTCTCGTGTGGT
AAATGGAAATAAAAATGTAAAAGAAAACACCCGAAAAAAAGTGCTTGAGGTCATTGATCGTTTGGATTACCGTCCAAATG
CGGTTGCGCGTGGCTTGGCGAGTAAGAAAACTACTACTGTAGGAGTTGTCATCCCAAATATTGCTAATAGTTATTTTGCT
ACTTTAGCAAGGGGGATTGATGATATTGCAACCATGTACAAGTACAATATTGTTCTTGCATCTAGTGATGAAAATGACGA
TCACGAAGTTACCGTGATTAACTCTCTGTTTGCCAAACAAGTAGACGGTATCATCTTCATGGGTTACCACTTGACGGAAA
AAATTCGTGCAGAATTTTCTCGTACTCGTACGCCGATTGTTCTAGCAGGAACAGTGGACCTTGAACACCAATTACCGAGT
GTTAACATCGATTATAAAGCTGCCGTTGAGGATTCTGTAACGCAGCTTGCCAAGAATAATGAAAAGGTTGCCTTTGTATC
AGGACCACTAATTGATGATATTAATGGCAAGCTCCGTCTAGCTGGTTATAAGGCTGGACTTGAAAAGAATAATTTGCGCT
ACAATGAAGGACTTGTCTTTGAAGCTAAATATAGCTATAAAGACGGCTTTGATTTAGCACAACGTGTCTTGAACTCTGGT
GCCACTGCTGCCTATGTTGGAGAAGATGAATTGGCTGCAGGTCTCTTGAATGGTCTCTTTGCTGCAGGTAAATCCGTTCC
AGAAGACTTCGAAATCATCACAAGCAATGACTCACCAATTACAAGCTACACACGTCCAAACCTTTCTAGTATTAATCATC
CTCTCTATGATTTAGGGGCAGTTAGCATGCGTATGTTGACTAAAATCATGAATAAGGAAGGGCTTGAAGAAAAAGATGTT
ATTCTTAATCACGGTCTTACCTTACGTCAGTCAACAAAATAA

Domains

Predicted by InterproScan.

Periplasmic binding protein-like domain (Peripla_BP_3)

(182-332)

Bacterial regulatory proteins, lacI family (LacI)

(8-53)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

76.877

100

0.769
  ccpA Streptococcus pneumoniae D39

75.976

100

0.76
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

55.589

99.399

0.553

Multiple sequence alignment