Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   IM816_RS13145 Genome accession   NZ_CP063231
Coordinates   3050772..3051173 (-) Length   133 a.a.
NCBI ID   WP_304441863.1    Uniprot ID   A0A1K1NLS1
Organism   Luteibacter flocculans strain EIF3     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3045772..3056173
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IM816_RS13130 (IM816_13110) - 3047603..3049633 (-) 2031 WP_072321664.1 methyl-accepting chemotaxis protein -
  IM816_RS13135 (IM816_13115) - 3049808..3050353 (-) 546 WP_250338425.1 chemotaxis protein CheW -
  IM816_RS13140 (IM816_13120) - 3050361..3050735 (-) 375 WP_072321666.1 response regulator -
  IM816_RS13145 (IM816_13125) pilG 3050772..3051173 (-) 402 WP_304441863.1 twitching motility response regulator PilG Regulator
  IM816_RS13150 (IM816_13130) gshB 3051468..3052409 (+) 942 WP_072321667.1 glutathione synthase -
  IM816_RS13155 (IM816_13135) - 3052406..3053266 (+) 861 WP_250338426.1 energy transducer TonB -
  IM816_RS13160 (IM816_13140) - 3053275..3053598 (-) 324 WP_218184720.1 hypothetical protein -
  IM816_RS13165 (IM816_13145) - 3053690..3054256 (+) 567 WP_072321670.1 YqgE/AlgH family protein -
  IM816_RS13170 (IM816_13150) ruvX 3054270..3054689 (+) 420 WP_250340762.1 Holliday junction resolvase RuvX -
  IM816_RS13175 (IM816_13155) - 3054735..3055661 (+) 927 WP_072321672.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14706.98 Da        Isoelectric Point: 8.4889

>NTDB_id=493980 IM816_RS13145 WP_304441863.1 3050772..3051173(-) (pilG) [Luteibacter flocculans strain EIF3]
MNENGRGNDLAGLRVMVIDDSKTIRRTAETLLKKEGCDVLTAVDGFEALAKISDQKPNIIFVDIMMPRLDGYQTCALIKN
NAQFRGTPVIMLSSKDGLFDKARGRIVGAEQYLTKPFTRDELLGAIHRYATAS

Nucleotide


Download         Length: 402 bp        

>NTDB_id=493980 IM816_RS13145 WP_304441863.1 3050772..3051173(-) (pilG) [Luteibacter flocculans strain EIF3]
GTGAACGAAAACGGACGCGGTAACGACCTGGCCGGATTGCGGGTCATGGTCATCGACGATTCGAAAACCATCCGACGCAC
GGCCGAGACCCTGCTGAAGAAGGAAGGCTGCGACGTACTGACCGCCGTCGACGGGTTCGAGGCACTGGCAAAGATCTCCG
ACCAGAAGCCGAACATCATCTTCGTCGACATCATGATGCCGCGCCTCGACGGCTACCAGACCTGCGCGCTGATCAAGAAC
AACGCGCAGTTCCGCGGTACGCCGGTGATCATGCTGTCCTCCAAGGACGGTCTGTTCGACAAGGCCCGCGGACGCATCGT
CGGGGCCGAGCAATACCTCACCAAACCGTTCACACGCGACGAGCTTCTCGGCGCGATCCATCGCTACGCGACGGCCAGTT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(15-126)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1K1NLS1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

71.074

90.977

0.647