Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   IMZ18_RS16340 Genome accession   NZ_CP063151
Coordinates   3045675..3046625 (-) Length   316 a.a.
NCBI ID   WP_014475804.1    Uniprot ID   A0A0C3FBZ6
Organism   Bacillus subtilis subsp. subtilis strain CMIN-4     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3040675..3051625
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IMZ18_RS16320 (IMZ18_16320) - 3041846..3042778 (-) 933 WP_014478835.1 restriction endonuclease -
  IMZ18_RS16325 (IMZ18_16325) yclQ 3043008..3043961 (-) 954 WP_014478834.1 petrobactin ABC transporter substrate-binding protein YclQ -
  IMZ18_RS16330 (IMZ18_16330) yclP 3043983..3044741 (-) 759 WP_014475806.1 petrobactin ABC transporter ATP-binding protein YclP -
  IMZ18_RS16335 (IMZ18_16335) yclO 3044735..3045682 (-) 948 WP_014475805.1 petrobactin ABC transporter permease YclO -
  IMZ18_RS16340 (IMZ18_16340) ceuB 3045675..3046625 (-) 951 WP_014475804.1 petrobactin ABC transporter permease YclN Machinery gene
  IMZ18_RS16345 (IMZ18_16345) thrD 3047015..3048379 (+) 1365 WP_014478832.1 aspartate kinase -
  IMZ18_RS16350 (IMZ18_16350) yczN 3048532..3048645 (+) 114 WP_014478831.1 YjcZ family sporulation protein -
  IMZ18_RS16355 (IMZ18_16355) yczM 3048727..3048816 (+) 90 WP_015482794.1 YjcZ family sporulation protein -
  IMZ18_RS16360 (IMZ18_16360) phrC 3048915..3049037 (-) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  IMZ18_RS16365 (IMZ18_16365) rapC 3049021..3050169 (-) 1149 WP_014475800.1 response regulator aspartate phosphatase RapC Regulator

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34871.27 Da        Isoelectric Point: 9.9364

>NTDB_id=493491 IMZ18_RS16340 WP_014475804.1 3045675..3046625(-) (ceuB) [Bacillus subtilis subsp. subtilis strain CMIN-4]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=493491 IMZ18_RS16340 WP_014475804.1 3045675..3046625(-) (ceuB) [Bacillus subtilis subsp. subtilis strain CMIN-4]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGTTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TCGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAACAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TGAAGTACAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCCCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCGGTGTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0C3FBZ6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525