Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   IMZ18_RS02295 Genome accession   NZ_CP063151
Coordinates   418518..420830 (+) Length   770 a.a.
NCBI ID   WP_014480703.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain CMIN-4     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 413518..425830
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IMZ18_RS02265 (IMZ18_02265) pdeH 415057..416286 (+) 1230 WP_014480707.1 cyclic di-GMP phosphodiesterase -
  IMZ18_RS02270 (IMZ18_02270) - 416262..416630 (-) 369 WP_014477834.1 hypothetical protein -
  IMZ18_RS02275 (IMZ18_02275) - 416744..416869 (-) 126 WP_003228793.1 hypothetical protein -
  IMZ18_RS02280 (IMZ18_02280) degQ 417091..417231 (+) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  IMZ18_RS02285 (IMZ18_02285) - 417416..418279 (+) 864 WP_014480705.1 polyprenyl synthetase family protein -
  IMZ18_RS02290 (IMZ18_02290) comX 418281..418502 (+) 222 WP_014480704.1 competence pheromone ComX -
  IMZ18_RS02295 (IMZ18_02295) comP 418518..420830 (+) 2313 WP_014480703.1 sensor histidine kinase Regulator
  IMZ18_RS02300 (IMZ18_02300) comA 420911..421555 (+) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  IMZ18_RS02305 (IMZ18_02305) yuxO 421574..421954 (+) 381 WP_017695528.1 hotdog fold thioesterase -
  IMZ18_RS02310 (IMZ18_02310) mnhG 421993..422367 (-) 375 WP_014477830.1 monovalent cation/H(+) antiporter subunit G -
  IMZ18_RS02315 (IMZ18_02315) mrpF 422351..422635 (-) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  IMZ18_RS02320 (IMZ18_02320) mrpE 422635..423111 (-) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  IMZ18_RS02325 (IMZ18_02325) mrpD 423117..424598 (-) 1482 WP_033881486.1 Na+/H+ antiporter subunit D -
  IMZ18_RS02330 (IMZ18_02330) mrpC 424591..424932 (-) 342 WP_014480700.1 Na(+)/H(+) antiporter subunit C -
  IMZ18_RS02335 (IMZ18_02335) mrpB 424932..425363 (-) 432 WP_003228819.1 Na(+)/H(+) antiporter subunit B -

Sequence


Protein


Download         Length: 770 a.a.        Molecular weight: 89648.90 Da        Isoelectric Point: 8.3765

>NTDB_id=493441 IMZ18_RS02295 WP_014480703.1 418518..420830(+) (comP) [Bacillus subtilis subsp. subtilis strain CMIN-4]
MYRYINVYKYLSLVFIILSFIYVIYLSYSFAFNIFVGADVKINEQGKLEVTNVLDYTDEYYSCVKKGDIILEVNGEKGSD
IQLKSGRLVNVESLIVERDNKSFHLQNVSLISEENLFMYLIPVISYSICLFCIFFIYRINKVRKSTSAYILILFLLFVSV
AYVSACGARRGEEISTYLLVLTLVSCPVLYIHFIYKYFIELGTKLFEKKILIIMYMLPLINLLLEDVLSNRLKSSAFLSN
LNLISFFVLVLTVSILIHKGIRKFKQKEQKSILKVLAYTNIFSFSPFIVFFAVPYVFFEKYVSPFSLAAFTLVIPFSLVY
QFMTNRLYNIDFVVGRLKYYGFLAITPTIIVVTIFNYIQQPKDIFYLVKLTIAIYVLMFAVFYFKEIIDFRFKLKRFTEK
FNYQDGIFKFTQLIKQASSVDQVLNHFKNTILEVLNIDNACVYDNSKGEITLLSKNNFKDLTYKNHEQYVKNFSGDIGKI
KEFKQGFIIKIGERGDRSFLVLCFSSYNTFKLTRDEIAWLQTLAFYTNVSLENVMKIEELMVHLEDLKQQESNPVWLKKL
MYTIEEKQRSDLARDLHDSVLQDLISLKRQCELFLGDFKKGDNPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLY
DLGLVKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYEDD
GVGFDQEKNTEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2313 bp        

>NTDB_id=493441 IMZ18_RS02295 WP_014480703.1 418518..420830(+) (comP) [Bacillus subtilis subsp. subtilis strain CMIN-4]
ATGTACAGATATATTAACGTCTATAAATATTTGTCTCTAGTTTTTATCATTTTAAGTTTTATTTATGTTATATACCTCTC
GTATAGCTTTGCTTTTAACATCTTCGTAGGTGCGGATGTAAAGATAAATGAACAGGGTAAGTTAGAGGTCACCAATGTTT
TAGATTATACAGATGAATATTATTCATGTGTGAAAAAGGGAGATATCATTCTTGAAGTAAATGGGGAGAAAGGCAGTGAT
ATTCAATTAAAAAGTGGAAGATTGGTCAATGTAGAAAGTTTAATTGTTGAGAGAGATAATAAATCATTTCATTTACAAAA
TGTAAGCCTAATCAGTGAAGAAAATTTATTTATGTATCTCATTCCTGTAATATCTTATTCAATCTGTTTATTTTGTATAT
TTTTTATTTATAGAATAAATAAAGTAAGAAAATCAACTTCTGCTTATATTTTAATTTTATTTTTGTTATTTGTATCAGTA
GCGTATGTAAGTGCATGTGGAGCAAGAAGAGGTGAAGAGATAAGCACTTATCTGCTTGTTCTTACTTTAGTCAGTTGTCC
GGTGTTATATATTCATTTTATATATAAATACTTTATAGAATTAGGAACAAAGTTATTCGAAAAGAAGATTTTAATCATTA
TGTATATGCTCCCGCTAATAAATCTTTTATTAGAGGACGTTCTGAGTAATAGATTAAAATCTTCGGCTTTTTTGTCTAAT
CTGAATTTGATTTCATTTTTTGTCCTAGTTCTTACTGTATCGATTCTTATCCATAAAGGGATAAGAAAATTTAAACAAAA
AGAGCAAAAGTCAATTTTGAAAGTCCTTGCTTATACAAATATCTTTTCTTTCAGTCCGTTTATTGTCTTTTTTGCTGTTC
CATATGTGTTTTTCGAGAAGTATGTCTCACCTTTTAGTTTGGCTGCTTTTACACTTGTTATACCTTTTTCTTTAGTATAT
CAATTTATGACTAATAGACTTTATAATATCGACTTTGTTGTGGGGCGGCTTAAGTACTACGGTTTTTTAGCCATTACACC
TACTATTATCGTAGTGACCATCTTTAATTACATTCAGCAACCAAAGGATATCTTTTATTTAGTTAAACTAACAATTGCAA
TATATGTTCTTATGTTTGCCGTTTTTTACTTTAAAGAAATCATTGATTTTCGTTTCAAGTTGAAAAGATTTACAGAGAAA
TTTAATTATCAAGATGGGATTTTTAAATTTACTCAGTTGATTAAGCAAGCATCATCAGTAGATCAAGTACTTAATCACTT
TAAAAATACAATCCTAGAAGTATTAAACATAGATAATGCTTGCGTGTATGATAATTCTAAAGGGGAAATCACCCTTCTTA
GTAAGAACAACTTTAAAGATCTGACTTATAAAAATCATGAGCAATATGTGAAAAATTTTTCTGGTGATATCGGTAAAATT
AAAGAGTTTAAACAAGGTTTTATTATTAAAATAGGTGAACGAGGAGACAGATCATTTTTAGTACTCTGTTTCTCAAGTTA
TAATACTTTTAAGTTAACAAGGGATGAAATTGCATGGCTTCAAACATTAGCATTTTATACAAATGTCTCATTGGAAAACG
TTATGAAAATCGAAGAATTGATGGTGCATCTTGAGGATTTAAAACAACAAGAATCCAACCCCGTATGGCTCAAAAAACTC
ATGTACACGATCGAGGAAAAACAACGCTCGGATCTCGCCCGCGATCTCCACGATTCGGTTCTTCAGGATTTGATTTCCTT
AAAACGCCAGTGTGAGCTGTTTTTGGGTGATTTTAAGAAGGGTGATAATCCGTGCCGTGAAGAGGTGCAGGACAAGCTTG
TACAGATGAATGAGCAGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAGCTGCGGCCGCAGCTTCTGTAT
GATCTTGGGCTGGTCAAGGCGCTGTCGAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATCCGTTTAAATAC
CGGGAGATTTACGGCTTCCCTTGATCTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTCTGTCTAATGCGG
TCAAGCACTCTCAGGCGACGGATGTGCTGATTATGCTCATCAGTATTCAAAACAAAATCGTTCTTCATTATGAGGATGAT
GGCGTAGGATTTGATCAGGAAAAGAATACTGAGCATTCCATGAGCATGGGGCTTTCTGGCATTAAGGAGAGAGTCAGGGC
TTTAGATGGGCGCCTTCGGATTGAAACAAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

55.917

99.87

0.558