Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   IL989_RS14455 Genome accession   NZ_CP062984
Coordinates   2936348..2938639 (-) Length   763 a.a.
NCBI ID   WP_088613350.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain PP19 isolate PP19     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 2931348..2943639
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IL989_RS14415 (IL989_14415) - 2931808..2932239 (+) 432 WP_045509497.1 Na(+)/H(+) antiporter subunit B -
  IL989_RS14420 (IL989_14420) - 2932239..2932580 (+) 342 WP_013353388.1 Na(+)/H(+) antiporter subunit C -
  IL989_RS14425 (IL989_14425) - 2932573..2934054 (+) 1482 WP_193350691.1 Na+/H+ antiporter subunit D -
  IL989_RS14430 (IL989_14430) - 2934060..2934536 (+) 477 WP_065982196.1 Na+/H+ antiporter subunit E -
  IL989_RS14435 (IL989_14435) - 2934536..2934820 (+) 285 WP_045509491.1 Na(+)/H(+) antiporter subunit F1 -
  IL989_RS14440 (IL989_14440) mnhG 2934804..2935178 (+) 375 WP_045509488.1 monovalent cation/H(+) antiporter subunit G -
  IL989_RS14445 (IL989_14445) - 2935218..2935601 (-) 384 WP_071347697.1 hotdog fold thioesterase -
  IL989_RS14450 (IL989_14450) comA 2935623..2936267 (-) 645 WP_014472195.1 response regulator transcription factor Regulator
  IL989_RS14455 (IL989_14455) comP 2936348..2938639 (-) 2292 WP_088613350.1 histidine kinase Regulator
  IL989_RS14460 (IL989_14460) comX 2938651..2938815 (-) 165 WP_007613432.1 competence pheromone ComX -
  IL989_RS14465 (IL989_14465) - 2938815..2939726 (-) 912 WP_125123647.1 polyprenyl synthetase family protein -
  IL989_RS14470 (IL989_14470) degQ 2939878..2940018 (-) 141 WP_013353398.1 degradation enzyme regulation protein DegQ Regulator
  IL989_RS14475 (IL989_14475) - 2940483..2940824 (+) 342 WP_045509476.1 hypothetical protein -
  IL989_RS14480 (IL989_14480) - 2940831..2942054 (-) 1224 WP_193350693.1 EAL and HDOD domain-containing protein -

Sequence


Protein


Download         Length: 763 a.a.        Molecular weight: 88450.67 Da        Isoelectric Point: 7.4202

>NTDB_id=492273 IL989_RS14455 WP_088613350.1 2936348..2938639(-) (comP) [Bacillus amyloliquefaciens strain PP19 isolate PP19]
MKSKYNKISVVLILLTLVYVIYLTYISTNNLLVGATISQNKQGEIKIKDVEDFTMAYYAGVQKGDIVKNINHQNVKSINI
QMNKLKNVNSMVVDRNGHDIEIKLNLFNDRNFSTYLIPIIFYVVCLFCCFFIIKINEEKNLKSALVLIVFLLSASIAYIS
AGGSAKGDLLSRCIMLLTLITVPLNYLLFLYHYFKELGTVLFSKKVFVLYLFPTINILFELFRSQLSFGDFIPKFNLISF
FLLFLIVAYYFIVILRRNKDTDQAHIIKVLVVINILAFSPFLCLYLIPYVFFNDYYVSSFLTASFMLLIPFSLVYQFMSN
KIYNVDFILSKLKYYGFLALTPTIILVTTIELLREPEENFYNLKLTFLIYILMLAVFYYKEILDFRFKLKRVSERFNYQD
SIYKFTQLIRNSSSLNQVFGELKTTILEVTLTSKVYIFEVTYDGNVKAFDERDSSLIDDYQVLLNSVTVEIGKITEFNQG
FAMKVGERGDRSFVVLCLSKMNTPRLSREEISWLKTLSFYVNVSIENVMKIEELMNHLEDLKKQETNPVWLKKLMFTIEE
KQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCHIEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYDLGLVKA
VSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLISIQNKVILHYEDDGVGCNQE
EGSGQAMSMGLSGIKERVRALDGRMKIDTSEGNGFKADIEMEL

Nucleotide


Download         Length: 2292 bp        

>NTDB_id=492273 IL989_RS14455 WP_088613350.1 2936348..2938639(-) (comP) [Bacillus amyloliquefaciens strain PP19 isolate PP19]
ATGAAGTCCAAGTACAATAAAATTTCAGTTGTCTTAATTCTGCTTACATTGGTATATGTCATTTATCTGACTTATATAAG
CACAAATAATCTTTTAGTCGGCGCCACAATTTCTCAAAATAAACAGGGCGAAATTAAAATAAAAGATGTAGAAGATTTTA
CAATGGCATATTACGCCGGAGTGCAAAAGGGAGATATAGTAAAGAATATTAACCACCAAAATGTAAAGTCAATTAATATT
CAAATGAATAAGCTGAAAAATGTAAACTCTATGGTCGTTGATAGAAACGGTCATGATATTGAGATTAAGCTCAATTTATT
TAATGATAGGAACTTCAGTACTTACTTAATACCGATAATTTTTTATGTAGTATGTTTATTTTGCTGTTTCTTCATCATCA
AAATAAATGAAGAAAAAAACTTAAAATCTGCTTTGGTACTAATTGTATTTCTTTTGTCTGCTTCAATTGCATATATTAGT
GCTGGAGGGTCGGCAAAAGGTGATTTGCTCAGCAGATGTATCATGTTGTTAACATTAATAACTGTACCATTAAATTATCT
TCTGTTTCTTTATCATTACTTTAAAGAATTAGGTACAGTGCTTTTCAGCAAAAAAGTTTTTGTATTGTATTTATTTCCAA
CTATAAATATATTGTTTGAATTATTTCGGTCGCAATTATCTTTTGGCGATTTTATTCCAAAATTTAATTTGATTTCGTTT
TTTCTTCTTTTTTTAATTGTAGCATATTATTTTATTGTTATTTTGAGAAGAAACAAAGATACTGATCAGGCACATATTAT
AAAGGTGCTTGTAGTTATAAATATATTGGCATTTTCGCCTTTTTTATGTCTGTATCTTATACCATATGTATTTTTTAATG
ATTATTATGTCTCTTCTTTCTTAACAGCATCATTTATGCTGCTAATACCTTTTTCACTTGTATATCAATTCATGTCGAAT
AAAATATATAACGTTGATTTTATCTTAAGTAAGTTAAAATATTACGGCTTTTTAGCTTTAACCCCAACTATAATTCTGGT
TACGACAATAGAGTTATTACGTGAGCCGGAAGAAAATTTTTACAATCTAAAACTGACATTTTTAATATACATTTTAATGT
TAGCTGTTTTTTATTATAAAGAAATACTCGATTTCCGGTTTAAATTAAAAAGGGTCTCAGAAAGATTCAATTACCAAGAC
AGTATATACAAGTTTACCCAATTAATCAGAAACTCGTCTTCTTTAAATCAGGTTTTTGGAGAATTAAAAACCACCATTCT
CGAAGTAACTCTTACGAGTAAAGTGTATATATTTGAAGTCACGTATGATGGGAATGTAAAGGCATTTGACGAAAGAGATT
CAAGTTTGATAGATGATTATCAAGTGCTTTTAAATAGTGTTACTGTTGAGATAGGAAAAATAACGGAGTTTAATCAAGGT
TTCGCAATGAAAGTAGGAGAGCGGGGAGATAGATCATTCGTTGTTCTCTGTTTGTCTAAGATGAATACGCCCCGCTTATC
ACGTGAAGAAATTTCTTGGTTAAAAACATTATCTTTTTACGTTAATGTTTCAATAGAAAACGTAATGAAAATCGAAGAAC
TTATGAATCATCTCGAAGATTTAAAGAAACAGGAGACAAACCCGGTCTGGCTCAAAAAGCTGATGTTTACGATTGAGGAA
AAGCAGCGGTCGGATTTGGCGCGTGATCTGCATGATTCGGTGCTGCAGGATTTGATTTCTTTGAAACGCCAGTGTGAGCT
GTTTCTGGCCGATTTTAAGAAAGAAGAGCCTTGTCACATAGAGGTGCAGGACAAGCTTCATCAGATGAATGAGCAGATGT
CGGATGTCATTTTGATGACCCGGGAGACGTGCCATGAGCTTCGGCCTCAGCTGCTGTATGATTTGGGTCTGGTGAAGGCG
GTATCCAAGCTTGCCGCTCAGCAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGGCCGGTTTACGGCGGCGCT
GGATTTGGATACGCAGCTGAATTTGTACCGCATCATTCAGGAATTTCTTTCGAATGCCATGAAGCATTCACAGGCGAATG
AGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAGGATGACGGAGTCGGATGCAATCAGGAA
GAAGGCAGCGGACAGGCGATGAGCATGGGGCTTTCGGGTATTAAGGAGCGCGTTCGGGCGCTTGACGGCCGGATGAAAAT
CGACACAAGTGAAGGAAATGGTTTTAAAGCGGATATTGAAATGGAATTGTAA

Domains


Predicted by InterproScan.

(563-632)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

53.896

100

0.544