Detailed information NTG0490597

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: KE639_RS12510
• Genome accession: NZ_CP074111
• Coordinates: 2682457..2683743 (-)
• Length: 428 a.a.
• NCBI ID: WP_061444769.1
• Uniprot ID: A0ABW8BH06
• Organism: Streptomyces sp. V17-9
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2677457..2688743

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KE639_RS12500 (KE639_02495)	-	2678660..2681284 (-)	2625	WP_212730146.1	valine--tRNA ligase	-
KE639_RS12505 (KE639_02496)	-	2681423..2682391 (+)	969	WP_102927979.1	hypothetical protein	-
KE639_RS12510 (KE639_02497)	clpX	2682457..2683743 (-)	1287	WP_061444769.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
KE639_RS12515 (KE639_02498)	clpP	2683936..2684649 (-)	714	WP_102927978.1	ATP-dependent Clp protease proteolytic subunit	Regulator
KE639_RS12520 (KE639_02499)	clpP	2684700..2685305 (-)	606	WP_051005918.1	ATP-dependent Clp protease proteolytic subunit	Regulator
KE639_RS12525 (KE639_02500)	tig	2685649..2687052 (-)	1404	WP_165287537.1	trigger factor	-
KE639_RS12540 (KE639_02503)	-	2687603..2687797 (-)	195	WP_007449834.1	hypothetical protein	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46770.55 Da
• Isoelectric Point: 4.7788

>NTDB_id=490597 KE639_RS12510 WP_061444769.1 2682457..2683743(-) (clpX) [Streptomyces sp. V17-9]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLESYVVGQEA
AKKALSVAVYNHYKRVQAGENGGAQGREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIEGRAGAKGIGFGAQIRSKREIESKDQFEQVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYERLFELDGVELDFERGALEAIADQAILRQTGARGLRAIMEEVLQGVMYEVPSRKDVARVVIT
ADVVLSNVNPTLIPRDSRGRGSGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=490597 KE639_RS12510 WP_061444769.1 2682457..2683743(-) (clpX) [Streptomyces sp. V17-9]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGGAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGGCCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAAGAGCTCGCGGAGACCA
GCGAGGTGCGCTGGGAGGAGCTCCCGAAGCCCCGCGAGATCTACGAGTTCCTCGAGAGCTACGTGGTCGGCCAGGAGGCG
GCCAAGAAGGCCCTCTCCGTCGCGGTGTACAACCACTACAAGCGGGTCCAGGCCGGCGAGAACGGCGGCGCCCAGGGCCG
CGAGGACGCCATCGAGTTGGCGAAGTCCAACATCCTCCTGCTGGGCCCCACGGGCTCCGGCAAGACCCTCCTCGCCCAGA
CCCTCGCCCGCATGCTGAACGTCCCGTTCGCGATCGCCGACGCCACGGCGCTCACCGAGGCGGGGTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCGCGGAAGAGTGAAAACCCCTCCATCACGCGCGACGTGTCCGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACCACGGCCTCCGTCCCGCCGCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCCTTCGCGGGCCTGGAGAAGATCATCGAGGGCCGGGCCGGCGC
CAAGGGCATCGGCTTCGGCGCGCAGATCCGCTCCAAGCGGGAGATCGAGTCCAAGGACCAGTTCGAGCAGGTCATGCCGG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGCCGACTGCCCGTCATCACCTCCGTCCACAACCTCGACCGC
GAGGCGCTCCTCCAGATCCTGGTCGAGCCGCGCAACGCGCTGGTCAAGCAGTACGAGCGCCTCTTCGAACTCGACGGCGT
CGAGCTGGACTTCGAGCGCGGGGCCTTGGAGGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGAGCCCGCGGCCTGC
GCGCCATCATGGAGGAAGTCCTCCAGGGCGTGATGTACGAGGTCCCGTCCCGCAAGGACGTCGCCCGCGTCGTCATCACC
GCCGACGTGGTCCTCTCCAACGTCAACCCGACGCTGATCCCGCGGGATTCACGGGGACGCGGCTCGGGCGAGCAGAAGAC
GGCGTAA

Domains

Predicted by InterProScan.

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.779	94.159	0.591
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.258	96.028	0.521